RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 RPS4XP62701 263 aaKnown RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 STK11Q15831 433 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF774Q6NX45 483 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 MYPOPQ86VE0 399 aaPredicted RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 TMEM17Q86X19 198 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 PAPOLGQ9BWT3 736 aaKnown RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ACTR6Q9GZN1 396 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 DEPPQ9NTK1 212 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 E9PLN8 166 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 STMND1H3BQB6 276 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ARPC5O15511 151 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 NKX2-8O15522 239 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 SLC19A2O60779 497 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 RGS11O94810 467 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 TMEM225BP0DP42 221 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CRABP1P29762 137 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 HTR2BP41595 481 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 OR3A4PP47883 348 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CYB561P49447 251 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CARD18P57730 90 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 Q0VFX4 171 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 HNF4GQ14541 408 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 GPR139Q6DWJ6 353 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PYHIN1Q6K0P9 492 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PRSS42Q7Z5A4 293 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CDC20BQ86Y33 519 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 OR5AS1Q8N127 324 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 GALNT11Q8NCW6 608 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 TMEM104Q8NE00 496 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PLPP5Q8NEB5 264 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 SRXN1Q9BYN0 137 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 NOX3Q9HBY0 568 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 MRPS18AQ9NVS2 196 aaKnown RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 NOX1Q9Y5S8 564 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 TMEM14AQ9Y6G1 99 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 LRP4O75096 1905 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 EEF1E1-BLOC1S5C9J1V9 151 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ACSM4P0C7M7 580 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 HTR2CP28335 458 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CX3CR1P49238 355 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ARHGDIBP52566 201 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 GABREP78334 506 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PMPCAQ10713 525 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 POU4F3Q15319 338 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ST3GAL2Q16842 350 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 SLC25A30Q5SVS4 291 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CD200R1LQ6Q8B3 271 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 C6orf15Q6UXA7 325 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CNEP1R1Q8N9A8 125 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 OR2M3Q8NG83 312 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF431Q8TF32 576 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 JAM3Q9BX67 310 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 C1orf198Q9H425 327 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ACKR4Q9NPB9 350 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 DIABLOQ9NR28 239 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 FZR1Q9UM11 496 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CAMK2AQ9UQM7 478 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PCDHGB2Q9Y5G2 931 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PCDHGA1Q9Y5H4 931 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 POLQO75417 2590 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ANKUB1A6NFN9 424 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PYCARD-AS1I3L0S3 204 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 COX6A1P12074 109 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 DUSP3P51452 185 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 SUCLG1P53597 346 aaKnown RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 FXYD4P59646 89 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 FAPQ12884 760 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 BTN2A1Q7KYR7 527 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 DND1Q8IYX4 353 aaKnown RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 LRRC75AQ8NAA5 344 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 OR2Y1Q8NGV0 311 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 ASB5Q8WWX0 329 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PIGCQ92535 297 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 AKAP1Q92667 903 aaKnown RBP eCLIP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 SNAPC3Q92966 411 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 HDHD3Q9BSH5 251 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 PBOV1Q9GZY1 135 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 OR51J1Q9H342 316 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CNTD2Q9H8S5 307 aa8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CHMP1AQ9HD42 196 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 CHCHD2Q9Y6H1 151 aaPredicted RBP8.07□□□□□ -1.12
CKAP2-201ENST00000258607 IGLV1-36A0A0B4J1U3 117 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 TRAV39A0A0B4J263 110 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF878C9JN71 531 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 AIPO00170 330 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 SP9P0CG40 484 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 RPA2P15927 270 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 HTR5AP47898 357 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 DAP3P51398 398 aaKnown RBP8.06□□□□□ -1.12
CKAP2-201ENST00000258607 CEACAM16Q2WEN9 425 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 OPN5Q6U736 354 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 NOXA1Q86UR1 476 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 FTMTQ8N4E7 242 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 DEDD2Q8WXF8 326 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 TOMM40LQ969M1 308 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 PLPPR2Q96GM1 343 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 PRO3102Q9H379 93 aa8.06□□□□□ -1.12
CKAP2-201ENST00000258607 HRASLSQ9HDD0 168 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms