RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 GGNQ86UU5 652 aa10.27□□□□□ -0.77
LIN28A-201ENST00000254231 MRPL48Q96GC5 212 aaKnown RBP10.27□□□□□ -0.77
LIN28A-201ENST00000254231 PLPPR2Q96GM1 343 aa10.27□□□□□ -0.77
LIN28A-201ENST00000254231 OPN3Q9H1Y3 402 aaPredicted RBP10.27□□□□□ -0.77
LIN28A-201ENST00000254231 UFSP2Q9NUQ7 469 aa10.27□□□□□ -0.77
LIN28A-201ENST00000254231 IGLV1-36A0A0B4J1U3 117 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 SGCEO43556 437 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 SRMP19623 302 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PMPCAQ10713 525 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 IRF3Q14653 427 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF239Q16600 458 aaKnown RBP10.26□□□□□ -0.77
LIN28A-201ENST00000254231 GLYATL3Q5SZD4 288 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 GFRALQ6UXV0 394 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 NR2C2APQ86WQ0 139 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 C20orf196Q8IYI0 205 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF679Q8IYX0 411 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 MAFIPQ8WZ33 124 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 IP6K3Q96PC2 410 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 OR2M2Q96R28 347 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 KCNK17Q96T54 332 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 SLIRPQ9GZT3 109 aaKnown RBP10.26□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF281Q9Y2X9 895 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PGA4P0DJD7 388 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PGA3P0DJD8 388 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 NPR2P20594 1047 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 RAB1AP62820 205 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PPP3R1P63098 170 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PLA2G7Q13093 441 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 NKAPLQ5M9Q1 402 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 TRIQKQ629K1 86 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 Q6ZNX1 250 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PRSS35Q8N3Z0 413 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PARP16Q8N5Y8 322 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 LGALS14Q8TCE9 139 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 NEK7Q8TDX7 302 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PSD2Q9BQI7 771 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 CKLFQ9UBR5 152 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 IDH3BO43837 385 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 ADRB1P08588 477 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 TMIGD3P0DMS9 266 aaPredicted RBP10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PIPP12273 146 aaPredicted RBP10.26□□□□□ -0.77
LIN28A-201ENST00000254231 HOXC12P31275 282 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PTGS2P35354 604 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PABPC1L2AQ5JQF8 200 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 THEM4Q5T1C6 240 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 FAM180AQ6UWF9 173 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 GLRX5Q86SX6 157 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 FAM109AQ8N4B1 249 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 PRR18Q8N4B5 295 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF519Q8TB69 540 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 CPT1CQ8TCG5 803 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 GPR148Q8TDV2 347 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 CMBLQ96DG6 245 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 FBXO17Q96EF6 278 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 GPR173Q9NS66 373 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF319Q9P2F9 582 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 LHFPL6Q9Y693 200 aa10.26□□□□□ -0.77
LIN28A-201ENST00000254231 A0A0G2JMP0 313 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 A0A0X1KG70 313 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 A0A1W2PP11 408 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 MED19A0JLT2 244 aaPredicted RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 TSC22D2O75157 780 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 GLI4P10075 376 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 MSR1P21757 451 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 CAMK2BQ13554 666 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF704Q6ZNC4 412 aaPredicted RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 SKA3Q8IX90 412 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ZCCHC24Q8N2G6 241 aaKnown RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 OR4M2Q8NGB6 313 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 HAS2Q92819 552 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 SMIM19Q96E16 107 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 S100A13Q99584 98 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 SLC30A2Q9BRI3 323 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 LIN7BQ9HAP6 207 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 FKBP14Q9NWM8 211 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 B3GNT3Q9Y2A9 372 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 TAF4O00268 1085 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 NME2P1O60361 137 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ABHD16AO95870 558 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 NME2P22392 152 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 UBE2NP61088 152 aaKnown RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 TMEM53Q6P2H8 277 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ANGPTL5Q86XS5 388 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF611Q8N823 705 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ZIC4Q8N9L1 334 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 OR52N1Q8NH53 320 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 CPNE4Q96A23 557 aaPredicted RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 TMEM41AQ96HV5 264 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 PAPOLGQ9BWT3 736 aaKnown RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ATG5Q9H1Y0 275 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 PLEKHB1Q9UF11 243 aaPredicted RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ING4Q9UNL4 249 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 MOKQ9UQ07 419 aa10.25□□□□□ -0.77
LIN28A-201ENST00000254231 EXOGQ9Y2C4 368 aaKnown RBP10.25□□□□□ -0.77
LIN28A-201ENST00000254231 ZNF587BE7ETH6 402 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 M0R135 149 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 NGFP01138 241 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 ATF1P18846 271 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 PTGER4P35408 488 aa10.24□□□□□ -0.77
LIN28A-201ENST00000254231 LHX2P50458 406 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms