RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RASSF2P50749 326 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 ECH1Q13011 328 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 CDK5R2Q13319 367 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 FAM166AQ6J272 317 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 ACSM5Q6NUN0 579 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 COLCA1Q6ZS62 124 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 NAA40Q86UY6 237 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 CLDND2Q8NHS1 167 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 HCAR1Q9BXC0 346 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 MED20Q9H944 212 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 ZDHHC8Q9ULC8 765 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 TIPRLO75663 272 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 TGFAP01135 160 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 RAC2P15153 192 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 ZNF3P17036 446 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 IGFBP5P24593 272 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 POU1F1P28069 291 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 FMO3P31513 532 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 HNRNPA0Q13151 305 aaKnown RBP19.48■□□□□ 0.71
LSM4-201ENST00000252816 ZMAT1Q5H9K5 638 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 LINC01590Q5TEZ4 76 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 FBXW12Q6X9E4 464 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 OR5L1Q8NGL2 311 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 UTP4Q969X6 686 aaKnown RBP19.48■□□□□ 0.71
LSM4-201ENST00000252816 ELMOD3Q96FG2 381 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 C1orf159Q96HA4 380 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 C1QTNF5Q9BXJ0 243 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 TMEM160Q9NX00 188 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 TREM2Q9NZC2 230 aa19.48■□□□□ 0.71
LSM4-201ENST00000252816 FAM183AA6NL82 134 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 KIAA1324LA8MWY0 1029 aaPredicted RBP19.47■□□□□ 0.71
LSM4-201ENST00000252816 CD55P08174 381 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 OSMP13725 252 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 GINS1Q14691 196 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 PCK2Q16822 640 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 AVPI1Q5T686 147 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 OR2T2Q6IF00 324 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 SLC27A4Q6P1M0 643 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 OR6K6Q8NGW6 343 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 DIRC2Q96SL1 478 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 EGLN1Q9GZT9 426 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 KCNS2Q9ULS6 477 aa19.47■□□□□ 0.71
LSM4-201ENST00000252816 SPARCP09486 303 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 ANXA8P13928 327 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 ENTPD1P49961 510 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 CDH15P55291 814 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 HFEQ30201 348 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 CHRFAM7AQ494W8 412 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 SHQ1Q6PI26 577 aaKnown RBP19.46■□□□□ 0.71
LSM4-201ENST00000252816 DCXRQ7Z4W1 244 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 OR5AS1Q8N127 324 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 ZNF556Q9HAH1 456 aa19.46■□□□□ 0.71
LSM4-201ENST00000252816 DDX28Q9NUL7 540 aaKnown RBP19.46■□□□□ 0.71
LSM4-201ENST00000252816 ZNF593O00488 134 aaPredicted RBP19.45■□□□□ 0.7
LSM4-201ENST00000252816 DEAF1O75398 565 aaPredicted RBP19.45■□□□□ 0.7
LSM4-201ENST00000252816 RBMXP38159 391 aaKnown RBP19.45■□□□□ 0.7
LSM4-201ENST00000252816 TNFAIP6P98066 277 aaPredicted RBP19.45■□□□□ 0.7
LSM4-201ENST00000252816 MVKQ03426 396 aa19.45■□□□□ 0.7
LSM4-201ENST00000252816 TEX30Q5JUR7 227 aa19.45■□□□□ 0.7
LSM4-201ENST00000252816 LINC01356Q8N9X3 169 aa19.45■□□□□ 0.7
LSM4-201ENST00000252816 ATG16L2Q8NAA4 619 aa19.45■□□□□ 0.7
LSM4-201ENST00000252816 OR2Z1Q8NG97 314 aa19.45■□□□□ 0.7
LSM4-201ENST00000252816 CCL17Q92583 94 aa19.45■□□□□ 0.7
LSM4-201ENST00000252816 MMADHCQ9H3L0 296 aaPredicted RBP19.45■□□□□ 0.7
LSM4-201ENST00000252816 CDC42EP3Q9UKI2 254 aa19.45■□□□□ 0.7
LSM4-201ENST00000252816 CUBNO60494 3623 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 CLDN25C9JDP6 229 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 M0R135 149 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 LCATP04180 440 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 ANOS1P23352 680 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 PRSS12P56730 875 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 LMO4P61968 165 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 CDK5Q00535 292 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 OTULINQ96BN8 352 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 NRBF2Q96F24 287 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 ZNF799Q96GE5 643 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 DCAF16Q9NXF7 216 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 WIPI2Q9Y4P8 454 aa19.44■□□□□ 0.7
LSM4-201ENST00000252816 FAM157AC9JC47 383 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 SURF4O15260 269 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 OTX1P32242 354 aaPredicted RBP19.43■□□□□ 0.7
LSM4-201ENST00000252816 TPTEP56180 551 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 C1orf146Q5VVC0 180 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 TMEM236Q5W0B7 351 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 FAHD1Q6P587 224 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 ST7LQ8TDW4 575 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 BEX2Q9BXY8 128 aa19.43■□□□□ 0.7
LSM4-201ENST00000252816 C5orf63A6NC05 138 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 DAPP51397 102 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 BLVRAP53004 296 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 GK2Q14410 553 aaPredicted RBP19.42■□□□□ 0.7
LSM4-201ENST00000252816 ATP6AP1Q15904 470 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 SNAI3Q3KNW1 292 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 FAM120AOSQ5T036 256 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 PLBD1Q6P4A8 553 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 IL17RELQ6ZVW7 336 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 OR8G5Q8NG78 346 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 OR5K1Q8NHB7 308 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 ITLN1Q8WWA0 313 aa19.42■□□□□ 0.7
LSM4-201ENST00000252816 SPTSSAQ969W0 71 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms