RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 CPEB2Q7Z5Q1 589 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 C11orf40Q8WZ69 217 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OR2A5Q96R48 311 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 WWTR1Q9GZV5 400 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 NXT1Q9UKK6 140 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PCNX2A6NKB5 2137 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 BLACEA4D250 179 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TGM6O95932 706 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 IFNA17P01571 189 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 MGMTP16455 207 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 AVPI1Q5T686 147 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OR51E1Q8TCB6 317 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF707Q96C28 371 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 SCMH1Q96GD3 660 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 HINT2Q9BX68 163 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CES1P1Q9UKY3 287 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TICRRQ7Z2Z1 1910 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OR6C65A6NJZ3 312 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF749O43361 778 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CHRM2P08172 466 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 HTR5AP47898 357 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ARF1P84077 181 aaKnown RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PLP2Q04941 152 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 C17orf67Q0P5P2 114 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 Q5BKY6 102 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 MANEAQ5SRI9 462 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF626Q68DY1 528 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM71Q6P5X7 295 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 BPIFCQ8NFQ6 507 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 OR1S1Q8NH92 325 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 ATOH1Q92858 354 aaPredicted RBP4.17□□□□□ -1.74
VPS13C-201ENST00000249837 CNTNAP3Q9BZ76 1288 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 HS3ST3A1Q9Y663 406 aa4.17□□□□□ -1.74
VPS13C-201ENST00000249837 PRSS37A4D1T9 235 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 SNAPINO95295 136 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 SYNGR4O95473 234 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 MT-ATP6P00846 226 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF728P0DKX0 622 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 RPA2P15927 270 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 LSMEM1Q8N8F7 131 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 FBXW5Q969U6 566 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 MRPS18AQ9NVS2 196 aaKnown RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 LUZP4Q9P127 313 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 MMACHCQ9Y4U1 282 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 LRP12Q9Y561 859 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 DENND4AQ7Z401 1863 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 F10P00742 488 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 P04436 131 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 H3F3CQ6NXT2 135 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CBLN3Q6UW01 205 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF695Q8IW36 515 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR8B4Q96RC9 309 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 JAM3Q9BX67 310 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ASH2LQ9UBL3 628 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 STMND1H3BQB6 276 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 HSPB6O14558 160 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 NME2P1O60361 137 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 IFNA5P01569 189 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ATP1B3P54709 279 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 HSF1Q00613 529 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 BAMBIQ13145 260 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 NR0B2Q15466 257 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 HSD17B11Q8NBQ5 300 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ST6GALNAC2Q9UJ37 374 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 PTRH2Q9Y3E5 179 aaKnown RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 IL33O95760 270 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ALDH3B1P43353 468 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 LBX1P52954 281 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 HSD17B7P56937 341 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 UBE2KP61086 200 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 C14orf28Q4W4Y0 310 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR52N5Q8NH56 324 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 SECTM1Q8WVN6 248 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 PLXNB1O43157 2135 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 DSPPQ9NZW4 1301 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR4C45A6NMZ5 311 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 MALLQ13021 153 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 STK11Q15831 433 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 CCDC54Q8NEL0 328 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZPLD1Q8TCW7 415 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 C2CD4CQ8TF44 421 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 BORCS8Q96FH0 119 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 NMNAT2Q9BZQ4 307 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 FGF21Q9NSA1 209 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 KLHL13Q9P2N7 655 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF230Q9UIE0 474 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 RECKO95980 971 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 NANOS3P60323 173 aaKnown RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 AAED1Q7RTV5 226 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ELSPBP1Q96BH3 223 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF845Q96IR2 970 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 SLC19A3Q9BZV2 496 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 GHITMQ9H3K2 345 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 PLEK2Q9NYT0 353 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 RPS10-NUDT3A0A1W2PQS6 291 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 TLCD2A6NGC4 264 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 RFPL4AA6NLU0 287 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 RFPL4AL1F8VTS6 287 aa4.16□□□□□ -1.74
VPS13C-201ENST00000249837 GSTZ1O43708 216 aaPredicted RBP4.16□□□□□ -1.74
VPS13C-201ENST00000249837 OR7C1O76099 320 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms