RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 CASRP41180 1078 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 GUCA1AP43080 201 aaPredicted RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF121P58317 390 aaPredicted RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 AIMP2Q13155 320 aaKnown RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 LUZP2Q86TE4 346 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 OR1J2Q8NGS2 313 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 OR51E1Q8TCB6 317 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 ROBO4Q8WZ75 1007 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 ADAT3Q96EY9 351 aaPredicted RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 RBM24Q9BX46 236 aaKnown RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 CACNG6Q9BXT2 260 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 HES7Q9BYE0 225 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 SLC17A5Q9NRA2 495 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF319Q9P2F9 582 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 RHBDD3Q9Y3P4 386 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 CIB4A0PJX0 185 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 POU3F2P20265 443 aaPredicted RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 CCR6P51684 374 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 C1orf100Q5SVJ3 147 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF813Q6ZN06 617 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 OR8B12Q8NGG6 310 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 OR6M1Q8NGM8 313 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 PNPLA2Q96AD5 504 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF837Q96EG3 531 aaPredicted RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 IP6K3Q96PC2 410 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 ULBP2Q9BZM5 246 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 NUDT15Q9NV35 164 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 PLA2G3Q9NZ20 509 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 RCE1Q9Y256 329 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 N6AMT1Q9Y5N5 214 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 NUBP2Q9Y5Y2 271 aa16.31■□□□□ 0.2
HOXC11-201ENST00000243082 NCOA6Q14686 2063 aaPredicted RBP16.31■□□□□ 0.2
HOXC11-201ENST00000243082 GGT3PA6NGU5 568 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 ACOT7O00154 380 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 ECDO95905 644 aaPredicted RBP16.3■□□□□ 0.2
HOXC11-201ENST00000243082 CTSSP25774 331 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 CX3CR1P49238 355 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 GRB2P62993 217 aaKnown RBP16.3■□□□□ 0.2
HOXC11-201ENST00000243082 OR1C1Q15619 314 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 ABLIM2Q6H8Q1 611 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 RANGRFQ9HD47 186 aaPredicted RBP16.3■□□□□ 0.2
HOXC11-201ENST00000243082 HRASLSQ9HDD0 168 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 ABI3Q9P2A4 366 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF318Q5VUA4 2279 aa16.3■□□□□ 0.2
HOXC11-201ENST00000243082 TRAV6A0A075B6T7 132 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 KDM4BO94953 1096 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 RFC3P40938 356 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 HIST1H3AP68431 136 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 HIST2H3PS2Q5TEC6 136 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 LINC00696Q6ZRV3 163 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 HIST2H3AQ71DI3 136 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 SULF2Q8IWU5 870 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 JAGN1Q8N5M9 183 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 IL22RA1Q8N6P7 574 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 NKAIN3Q8N8D7 197 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 GJC3Q8NFK1 279 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 SOX7Q9BT81 388 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF703Q9H7S9 590 aaPredicted RBP16.29■□□□□ 0.2
HOXC11-201ENST00000243082 NEK6Q9HC98 313 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 DIABLOQ9NR28 239 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 COPZ2Q9P299 210 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 OTOGLQ3ZCN5 2332 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 A0A1B0GVI7 797 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 ANKRD20A5PA0PJZ0 165 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 LDLRAD4O15165 306 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 GNALP38405 381 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 TMEM255AQ5JRV8 349 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF529Q6P280 563 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 LRRC18Q8N456 261 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 DEFB124Q8NES8 71 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 DMRTB1Q96MA1 342 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 FYTTD1Q96QD9 318 aaKnown RBP16.29■□□□□ 0.2
HOXC11-201ENST00000243082 BEX2Q9BXY8 128 aa16.29■□□□□ 0.2
HOXC11-201ENST00000243082 GMDSO60547 372 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 HPNP05981 417 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 BDKRB2P30411 391 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF84P51523 738 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 AP3S2P59780 193 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 GALK2Q01415 458 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 CCDC92Q53HC0 331 aaPredicted RBP16.28■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF283Q8N7M2 679 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 OR1M1Q8NGA1 313 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 OR4D6Q8NGJ1 314 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 FOXRED1Q96CU9 486 aaPredicted RBP16.28■□□□□ 0.2
HOXC11-201ENST00000243082 ZNF845Q96IR2 970 aaPredicted RBP16.28■□□□□ 0.2
HOXC11-201ENST00000243082 SLC5A6Q9Y289 635 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 MED13Q9UHV7 2174 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 A0A0A6YYJ9 748 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 OR5H15A6NDH6 313 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 E9PLN8 166 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 LINC01387J3KSC0 135 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 CELA3AP09093 270 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 CCL1P22362 96 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 RRAS2P62070 204 aaPredicted RBP16.28■□□□□ 0.2
HOXC11-201ENST00000243082 MRPS34P82930 218 aaKnown RBP16.28■□□□□ 0.2
HOXC11-201ENST00000243082 CD83Q01151 205 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 RSPO1Q2MKA7 263 aaPredicted RBP16.28■□□□□ 0.2
HOXC11-201ENST00000243082 FAM57BQ71RH2 274 aa16.28■□□□□ 0.2
HOXC11-201ENST00000243082 ABHD12BQ7Z5M8 362 aaPredicted RBP16.28■□□□□ 0.2
HOXC11-201ENST00000243082 CLEC1AQ8NC01 280 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms