RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 A6NIZ1 184 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 B8ZZF3 427 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 SMLR1H3BR10 107 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 SSNA1O43805 119 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 FADS1O60427 444 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 GMDSO60547 372 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 NDUFB6O95139 128 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 CD37P11049 281 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 CXCL3P19876 107 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 CDK2P24941 298 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 ITPKBP27987 946 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 CRABP1P29762 137 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 NR0B1P51843 470 aaKnown RBP7□□□□□ -1.29
CXCR4-201ENST00000241393 SLC26A5P58743 744 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 RAP1BP61224 184 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 RAP1AP62834 184 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 DHODHQ02127 395 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 TDGQ13569 410 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 CLPPQ16740 277 aaPredicted RBP7□□□□□ -1.29
CXCR4-201ENST00000241393 DEFB133Q30KQ1 61 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 RNASE12Q5GAN4 147 aaKnown RBP7□□□□□ -1.29
CXCR4-201ENST00000241393 ANKRD16Q6P6B7 361 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 GLDNQ6ZMI3 551 aaPredicted RBP7□□□□□ -1.29
CXCR4-201ENST00000241393 TMPRSS12Q86WS5 348 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 OR1L3Q8NH93 324 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 TMEM234Q8WY98 164 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 TMEM106AQ96A25 262 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 R3HDM4Q96D70 268 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 SORCS2Q96PQ0 1159 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 PHF7Q9BWX1 381 aaPredicted RBP7□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF436Q9C0F3 470 aaPredicted RBP7□□□□□ -1.29
CXCR4-201ENST00000241393 GPN1Q9HCN4 374 aaPredicted RBP7□□□□□ -1.29
CXCR4-201ENST00000241393 TMED7Q9Y3B3 224 aa7□□□□□ -1.29
CXCR4-201ENST00000241393 EML5Q05BV3 1969 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 BRWD1Q9NSI6 2320 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 LINC00862A6NCI5 91 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 TUBAL3A6NHL2 446 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 C4orf47A7E2U8 309 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 A8MUA0 341 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 H7C417 338 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 SULT1C2O00338 296 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 SLC17A2O00624 439 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 TOX3O15405 576 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-201ENST00000241393 NOS1APO75052 506 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-201ENST00000241393 RBBP9O75884 186 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 OR6A2O95222 327 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 AHSA1O95433 338 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 CSF1P09603 554 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 GIPP09681 153 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-201ENST00000241393 TMEM225BP0DP42 221 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 DNASE1P24855 282 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ABCD3P28288 659 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 KIR3DL2P43630 455 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 SOX2P48431 317 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 CAPZA1P52907 286 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 SNRPD2P62316 118 aaKnown RBP6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ZP4Q12836 540 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 NSDHLQ15738 373 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ACKR1Q16570 336 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 WDR38Q5JTN6 314 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 C1QTNF12Q5T7M4 302 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 C1orf140Q5VVS0 124 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 DNM1P34Q6PK57 102 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 WDR74Q6RFH5 385 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-201ENST00000241393 TEX261Q6UWH6 196 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 MARCH3Q86UD3 253 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 PM20D2Q8IYS1 436 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 PRSS35Q8N3Z0 413 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 KNL1Q8NG31 2342 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 GPR119Q8TDV5 335 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 THEM6Q8WUY1 208 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ASB13Q8WXK3 278 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ST8SIA1Q92185 356 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF524Q96C55 264 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 NXPE2Q96DL1 559 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 MLST8Q9BVC4 326 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 RTN4RQ9BZR6 473 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 ELOVL3Q9HB03 270 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 NOX3Q9HBY0 568 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 MTFP1Q9UDX5 166 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 U3KQ87 197 aa6.99□□□□□ -1.29
CXCR4-201ENST00000241393 IGLV3-12A0A075B6K2 115 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 TRAV8-7A0A075B6U6 113 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 A0A0A6YYH2 397 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 SLC22A23A1A5C7 686 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 GGT3PA6NGU5 568 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 A6NJ64 397 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 H7C1C5 153 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 PLPP3O14495 311 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 MBTPS2O43462 519 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 CREBL2O60519 120 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-201ENST00000241393 SLC22A5O76082 557 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 OR2A4O95047 310 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 NUDT14O95848 222 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 IFNA7P01567 189 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 CD2P06729 351 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 MELTFP08582 738 aa6.98□□□□□ -1.29
CXCR4-201ENST00000241393 IL6RP08887 468 aaPredicted RBP6.98□□□□□ -1.29
CXCR4-201ENST00000241393 OR3A3P47888 321 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms