RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 OR1K1Q8NGR3 316 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 STARD4Q96DR4 205 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 DERL3Q96Q80 235 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 SLC24A3Q9HC58 644 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 CCDC59Q9P031 241 aaKnown RBP16.24■□□□□ 0.19
SNX17-201ENST00000233575 TIMM10BQ9Y5J6 103 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 TPRP12270 2363 aaKnown RBP16.24■□□□□ 0.19
SNX17-201ENST00000233575 TTLL8A6PVC2 850 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 P2RY10O00398 339 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 SLC19A2O60779 497 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 UCHL1P09936 223 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 PTGER4P35408 488 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 HNRNPA0Q13151 305 aaKnown RBP16.24■□□□□ 0.19
SNX17-201ENST00000233575 SF3B4Q15427 424 aaKnown RBP eCLIP16.24■□□□□ 0.195e-7■■■■□ 20.7
SNX17-201ENST00000233575 Q499Y3 187 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 PRSS45Q7RTY3 260 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 SLC25A46Q96AG3 418 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 MED18Q9BUE0 208 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 NIPAL2Q9H841 368 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 SH3BGRL2Q9UJC5 107 aa16.24■□□□□ 0.19
SNX17-201ENST00000233575 GATBO75879 557 aaKnown RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 LYZL6O75951 148 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 TMIGD3P0DMS9 266 aaPredicted RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 CRYGSP22914 178 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 CTSSP25774 331 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 OTX1P32242 354 aaPredicted RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 HGFACQ04756 655 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 TSC22D1Q15714 1073 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 PABPC1L2AQ5JQF8 200 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 FAM57BQ71RH2 274 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 ABHD12BQ7Z5M8 362 aaPredicted RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 CPEB3Q8NE35 698 aaKnown RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 OR1F12Q8NHA8 337 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 MCFD2Q8NI22 146 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 GPR148Q8TDV2 347 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 DACH2Q96NX9 599 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 SOX7Q9BT81 388 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 HDHD2Q9H0R4 259 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 OPN3Q9H1Y3 402 aaPredicted RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 ACACBO00763 2458 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 LOC107986453A0A1B0GWG9 222 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 OR6C6A6NF89 314 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 PRRG2O14669 202 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 CGAP01215 116 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 ACSM4P0C7M7 580 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 SLC6A9P48067 706 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 OR10A3P58181 314 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 PCBD1P61457 104 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 ZNF404Q494X3 552 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 ZNF544Q6NX49 715 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 PCSK4Q6UW60 755 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 NCCRP1Q6ZVX7 275 aaPredicted RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 ELMOD2Q8IZ81 293 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 OR8B12Q8NGG6 310 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 BCL2L2Q92843 193 aaPredicted RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 KCNS3Q9BQ31 491 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 RNF121Q9H920 327 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 PLSCR4Q9NRQ2 329 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 NUFIP1Q9UHK0 495 aaKnown RBP16.23■□□□□ 0.19
SNX17-201ENST00000233575 ZNF835Q9Y2P0 537 aa16.23■□□□□ 0.19
SNX17-201ENST00000233575 LMX1BO60663 402 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 RAD51DO75771 328 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 IL2RAP01589 272 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 ANXA2P07355 339 aaKnown RBP16.22■□□□□ 0.19
SNX17-201ENST00000233575 GLI4P10075 376 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 HTR5AP47898 357 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 MTNR1BP49286 362 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 RORCP51449 518 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 SLC36A2Q495M3 483 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 HSD17B12Q53GQ0 312 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 ANKRD16Q6P6B7 361 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 Q6ZT83 130 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 ZNF610Q8N9Z0 462 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 TSEN15Q8WW01 171 aaKnown RBP16.22■□□□□ 0.19
SNX17-201ENST00000233575 TMEM106AQ96A25 262 aa16.22■□□□□ 0.19
SNX17-201ENST00000233575 TP63Q9H3D4 680 aaPredicted RBP16.22■□□□□ 0.19
SNX17-201ENST00000233575 PLEKHB1Q9UF11 243 aaPredicted RBP16.22■□□□□ 0.19
SNX17-201ENST00000233575 M0R135 149 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 ISG15P05161 165 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 CD79AP11912 226 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 TIMP3P35625 211 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 SOX6P35712 828 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 BMXP51813 675 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 ASPHD2Q6ICH7 369 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 PAMR1Q6UXH9 720 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 ASB5Q8WWX0 329 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 ZNF799Q96GE5 643 aa16.21■□□□□ 0.19
SNX17-201ENST00000233575 C6orf62Q9GZU0 229 aaPredicted RBP16.21■□□□□ 0.19
SNX17-201ENST00000233575 NXF2Q9GZY0 626 aaKnown RBP16.21■□□□□ 0.19
SNX17-201ENST00000233575 A0A1W2PR80 420 aa16.21■□□□□ 0.18
SNX17-201ENST00000233575 MYL9P24844 172 aa16.21■□□□□ 0.18
SNX17-201ENST00000233575 TBRG1Q3YBR2 411 aa16.21■□□□□ 0.18
SNX17-201ENST00000233575 ZNF704Q6ZNC4 412 aaPredicted RBP16.21■□□□□ 0.18
SNX17-201ENST00000233575 GABRG1Q8N1C3 465 aa16.21■□□□□ 0.18
SNX17-201ENST00000233575 OR51E1Q8TCB6 317 aa16.21■□□□□ 0.18
SNX17-201ENST00000233575 SLC17A5Q9NRA2 495 aa16.21■□□□□ 0.18
SNX17-201ENST00000233575 PROCRQ9UNN8 238 aa16.21■□□□□ 0.18
SNX17-201ENST00000233575 TRAV8-7A0A075B6U6 113 aa16.2■□□□□ 0.18
SNX17-201ENST00000233575 TRBV5-7A0A0A0MS05 114 aa16.2■□□□□ 0.18
SNX17-201ENST00000233575 ARL6IP5O75915 188 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms