RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 COLCA1Q6ZS62 124 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 ZNF367Q7RTV3 350 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 FAM220AQ7Z4H9 259 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 KLBQ86Z14 1044 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 YIPF7Q8N8F6 280 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 ACBD4Q8NC06 268 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 MUL1Q969V5 352 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 SPTSSAQ969W0 71 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 COG8Q96MW5 612 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 DCLRE1CQ96SD1 692 aaKnown RBP12.18□□□□□ -0.46
SEC61B-201ENST00000223641 MGLLQ99685 303 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 FAM206AQ9NX38 181 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 NDRG3Q9UGV2 375 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 ST6GALNAC2Q9UJ37 374 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 R4GMQ9 66 aa12.18□□□□□ -0.46
SEC61B-201ENST00000223641 USP9XQ93008 2570 aaPredicted RBP12.17□□□□□ -0.46
SEC61B-201ENST00000223641 M0R135 149 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 INMTO95050 263 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 CECR9P0C854 216 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 HSD11B1P28845 292 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 PEX19P40855 299 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 ALDH3B2P48448 385 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 IDH3GP51553 393 aaPredicted RBP12.17□□□□□ -0.46
SEC61B-201ENST00000223641 CCR9P51686 369 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 GTF2A1P52655 376 aaPredicted RBP12.17□□□□□ -0.46
SEC61B-201ENST00000223641 GBX2P52951 348 aaPredicted RBP12.17□□□□□ -0.46
SEC61B-201ENST00000223641 TPTEP56180 551 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 PSMA6P60900 246 aaKnown RBP12.17□□□□□ -0.46
SEC61B-201ENST00000223641 MLLT11Q13015 90 aaPredicted RBP12.17□□□□□ -0.46
SEC61B-201ENST00000223641 TAF13Q15543 124 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 NAA40Q86UY6 237 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 SLC30A7Q8NEW0 376 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 IL17RDQ8NFM7 739 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 ZNF799Q96GE5 643 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 DOK1Q99704 481 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 TRIM36Q9NQ86 728 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 G6PC2Q9NQR9 355 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 FRRS1LQ9P0K9 344 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 SIRT4Q9Y6E7 314 aaPredicted RBP12.17□□□□□ -0.46
SEC61B-201ENST00000223641 DOPEY1Q5JWR5 2465 aa12.17□□□□□ -0.46
SEC61B-201ENST00000223641 TMEM269A0A1B0GVZ9 245 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 F5H5K5 113 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 PLPP2O43688 288 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 CD1AP06126 327 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 ZNF35P13682 527 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 APLNRP35414 380 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 PSMB10P40306 273 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 CX3CR1P49238 355 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 GDI2P50395 445 aaKnown RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 PRKXP51817 358 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 GP2P55259 537 aaKnown RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 ZNF121P58317 390 aaPredicted RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 TAS2R43P59537 309 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 NANOS3P60323 173 aaKnown RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 GALK2Q01415 458 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 GPR50Q13585 617 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 TPBGQ13641 420 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 CDK5R1Q15078 307 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 NEDD8Q15843 81 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 TBC1D28Q2M2D7 210 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 ZNF829Q3KNS6 432 aaPredicted RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 DMKNQ6E0U4 476 aaPredicted RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 RPL22L1Q6P5R6 122 aaKnown RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 CATSPERDQ86XM0 798 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 PRSS35Q8N3Z0 413 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 OR1J2Q8NGS2 313 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 OR2G2Q8NGZ5 317 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 SSC4DQ8WTU2 575 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 DACH2Q96NX9 599 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 OPALINQ96PE5 141 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 MED18Q9BUE0 208 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 C1QTNF6Q9BXI9 259 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 C1QTNF5Q9BXJ0 243 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 MOB1AQ9H8S9 216 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 VCX3AQ9NNX9 186 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 NUFIP1Q9UHK0 495 aaKnown RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 SCOCQ9UIL1 159 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 GRIP1Q9Y3R0 1128 aa12.16□□□□□ -0.46
SEC61B-201ENST00000223641 KLF2Q9Y5W3 355 aaPredicted RBP12.16□□□□□ -0.46
SEC61B-201ENST00000223641 SPTBN1Q01082 2364 aaKnown RBP12.15□□□□□ -0.46
SEC61B-201ENST00000223641 C5orf49A4QMS7 147 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 J3QW42 95 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 RPP14O95059 124 aaKnown RBP12.15□□□□□ -0.46
SEC61B-201ENST00000223641 IGLV3-1P01715 115 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 CCL2P13500 99 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 CPEP16870 476 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 ANOS1P23352 680 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 PTAFRP25105 342 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 PCSK6P29122 969 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 WNT5AP41221 380 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 NR1H2P55055 460 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 NAAAQ02083 359 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 MFGE8Q08431 387 aaPredicted RBP12.15□□□□□ -0.46
SEC61B-201ENST00000223641 ALKBH1Q13686 389 aaKnown RBP12.15□□□□□ -0.46
SEC61B-201ENST00000223641 TIGD6Q17RP2 521 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 ARMCX4Q5H9R4 360 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 WDR38Q5JTN6 314 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 PAQR4Q8N4S7 273 aaPredicted RBP12.15□□□□□ -0.46
SEC61B-201ENST00000223641 ZNF283Q8N7M2 679 aa12.15□□□□□ -0.46
SEC61B-201ENST00000223641 LINC01560Q8TB33 94 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms