RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 RNPS1Q15287 305 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CEP78Q5JTW2 689 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 FAM27BQ5VT28 67 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 C19orf18Q8NEA5 215 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TMEM106AQ96A25 262 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 FAM206AQ9NX38 181 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 OR52A1Q9UKL2 312 aa17.32■□□□□ 0.36
TNFRSF1A-201ENST00000162749 NCOR2Q9Y618 2525 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 FAM157BP0CG42 384 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 NR4A2P43354 598 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TSPO2Q5TGU0 170 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 RSBN1Q5VWQ0 802 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 GLCCI1Q86VQ1 547 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 LRRC28Q86X40 367 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 DTX3Q8N9I9 347 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 OR4M1Q8NGD0 313 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SLCO5A1Q9H2Y9 848 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 RNF122Q9H9V4 155 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CALHM2Q9HA72 323 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TMEM38BQ9NVV0 291 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ZNF724A8MTY0 619 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 K7EM74 188 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TGM6O95932 706 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 IGHV3-9P01782 118 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 EIF2S3P41091 472 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 MAP2K3P46734 347 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 CEACAM16Q2WEN9 425 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 Q6ZS92 163 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SAMD12Q8N8I0 201 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 GJC3Q8NFK1 279 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ST6GAL2Q96JF0 529 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 PRDM14Q9GZV8 571 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SLC25A18Q9H1K4 315 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 RNF121Q9H920 327 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 BRD7Q9NPI1 651 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 PARPBPQ9NWS1 579 aa17.31■□□□□ 0.36
TNFRSF1A-201ENST00000162749 A0A1B0GVC2 190 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 A6NIN4 97 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 YES1P07947 543 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 NPR2P20594 1047 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 HSD11B1P28845 292 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ATAD3CQ5T2N8 411 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 KLHL24Q6TFL4 600 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 FBXO17Q96EF6 278 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 GPR35Q9HC97 309 aa17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 DDX28Q9NUL7 540 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 RBFOX1Q9NWB1 397 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 AK6Q9Y3D8 172 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 INTS1Q8N201 2190 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TRBV5-7A0A0A0MS05 114 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 DOK2O60496 412 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 B4GALT1P15291 398 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 PSMA6P60900 246 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 HIST1H3AP68431 136 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 HIST2H3PS2Q5TEC6 136 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 HIST2H3AQ71DI3 136 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SIAH3Q8IW03 269 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ENKURQ8TC29 256 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TSEN15Q8WW01 171 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ZC3HAV1LQ96H79 300 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 FOXB1Q99853 325 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 NIPAL2Q9H841 368 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SLC7A10Q9NS82 523 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SLC5A6Q9Y289 635 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ANKRD61A6NGH8 418 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 SLC22A20A6NK97 555 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 LYRM1O43325 122 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 RAF1P04049 648 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ISG15P05161 165 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TMEM53Q6P2H8 277 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TRMT10AQ8TBZ6 339 aaKnown RBP17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ZCCHC4Q9H5U6 513 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 PLSCR2Q9NRY7 297 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ZNF221Q9UK13 617 aa17.29■□□□□ 0.36
TNFRSF1A-201ENST00000162749 HMX3A6NHT5 357 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 AQP7O14520 342 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ZNHIT1O43257 154 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 LANCL1O43813 399 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 EPXP11678 715 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TAF13Q15543 124 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 BCL2L15Q5TBC7 163 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 STAC2Q6ZMT1 411 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 RBMXL3Q8N7X1 1067 aaKnown RBP17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 DUSP18Q8NEJ0 188 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 OR5H6Q8NGV6 325 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ASB5Q8WWX0 329 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 GFI1Q99684 422 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 LINC00470Q9BZP3 86 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 NEK6Q9HC98 313 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 MYO7BQ6PIF6 2116 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 LOC107986453A0A1B0GWG9 222 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 NOTOA8MTQ0 251 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 A8MV72 311 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 TTRP02766 147 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 PRKXP51817 358 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ZNF704Q6ZNC4 412 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 ADGRE4PQ86SQ3 457 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 MCEMP1Q8IX19 187 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 PBOV1Q9GZY1 135 aa17.28■□□□□ 0.36
TNFRSF1A-201ENST00000162749 DKK4Q9UBT3 224 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms