RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Fbxw17Q8CFE8 466 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mrpl48Q8JZS9 211 aaKnown RBP13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fyttd1Q91Z49 317 aaKnown RBP13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Nmrk2Q9D7C9 195 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Lypd2Q9DD23 127 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Sh3bgrlQ9JJU8 114 aaKnown RBP13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 TfecQ9WTW4 317 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Zfp873A0A1B0GT64 667 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Birc7A2AWP0 285 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 BC051665E9Q623 330 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 4930451I11RikE9Q9R3 111 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm37240E9QAY5 252 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn2r89O35199 507 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Lyl1P27792 278 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 FahP35505 419 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Crabp1P62965 137 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gpr55Q3UJF0 327 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Lin54Q571G4 749 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Zfp180Q6NZI9 655 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Rps27Q6ZWU9 84 aaKnown RBP13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Bhlhe23Q8BGW3 223 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dmrta1Q8CFG4 490 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cuedc1Q8R3V6 388 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 MetrnlQ8VE43 311 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Asb18Q8VHA6 467 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Pla1aQ8VI78 456 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Tmem63aQ91YT8 804 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Slc25a36Q922G0 311 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 NanpQ9CPT3 248 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fgf16Q9ESL8 207 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Gm5493S4R2D1 92 aa13.42□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Il17dA0A0B4J1G4 205 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr685A0A1L1SVG7 331 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Btbd8D3YUB6 377 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Tmem265E9Q8G3 109 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r168K7N6B6 309 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Raet1cO08604 253 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dbil5O09035 87 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cldn4O35054 210 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Pbx2O35984 430 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Galr2O88854 371 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Serf1O88892 62 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Ighg1P01869 393 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Zfp27P10077 819 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Tcte3P11985 191 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Polr2gP62488 172 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Masp1P98064 704 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Rpusd3Q14AI6 344 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Slc2a6Q3UDF0 497 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 GcsamQ6RFH4 181 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Rsl1Q7M6Y1 485 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Slc35f2Q7TML3 375 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r189Q8K3N3 312 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 AfmidQ8K4H1 305 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr1094Q8VF13 330 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr1411Q8VFC4 323 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr214Q8VG27 320 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr46Q8VGJ4 318 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Pga5Q9D106 387 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fgf21Q9JJN1 210 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r137D3YTY1 307 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r143E9PUW9 307 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r157E9Q069 297 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr568E9Q554 313 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r139E9Q8L6 297 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Prps1l3G3UXL2 318 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r112G3UY48 297 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r122K7N726 305 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r135K9J7G0 307 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r125L7N227 307 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r116L7N2A6 307 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Nkx2-2P42586 273 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 1700012B07RikQ3V0S8 276 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fam220aQ3ZN08 260 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Chst14Q80V53 376 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Zfand1Q8BFR6 268 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cnksr3Q8BMA3 555 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Csnk1g2Q8BVP5 415 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Cep68Q8C0D9 733 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 C1saQ8CG14 688 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Klk14Q8CGR5 250 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mrpl38Q8K2M0 380 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r23Q8R2D0 302 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Abhd14bQ8VCR7 210 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr676Q8VGZ9 317 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Hdac8Q8VH37 377 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Tram1Q91V04 374 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Mtif3Q9CZD5 276 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Prps1Q9D7G0 318 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 HikeshiQ9DD02 197 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Vmn1r100Q9EPS5 307 aa13.41□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Dennd4cA6H8H2 1906 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Htr2aP35363 471 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Hmga2P52927 108 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Rps4xP62702 263 aaKnown RBP13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 CelQ64285 599 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Ccdc36Q6PDM4 574 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Olfr1166Q7TR27 316 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Fndc9Q8BJN4 226 aa13.4□□□□□ -0.26
Ushbp1-201ENSMUST00000049184 Commd5Q8R395 224 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 56.8 ms