RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CD46P15529 392 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 MSR1P21757 451 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 RFX2P48378 723 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 PPT1P50897 306 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 PSG6Q00889 435 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 LTC4SQ16873 150 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 C1QL3Q5VWW1 255 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 RTL6Q6ICC9 239 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 SUMF1Q8NBK3 374 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 OR4C16Q8NGL9 310 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 OR1N1Q8NGS0 311 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 PTP4A1Q93096 173 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 WDFY2Q96P53 400 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 B3GNT2Q9NY97 397 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 SH3BGRL2Q9UJC5 107 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 FAM221AA4D161 298 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 GLULP15104 373 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 RPA2P15927 270 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 IL2RGP31785 369 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 CDAP32320 146 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 AKR1C1Q04828 323 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 FAM199XQ6PEV8 388 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-216ENST00000639300 TMUB2Q71RG4 321 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 CENPVL1A0A0U1RR11 272 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 GRB2P62993 217 aaKnown RBP13.03□□□□□ -0.32
SCARB2-216ENST00000639300 EXT1Q16394 746 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 TAF9Q16594 264 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.03□□□□□ -0.32
SCARB2-216ENST00000639300 MDGA2Q7Z553 956 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 HSD17B11Q8NBQ5 300 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 OR5L1Q8NGL2 311 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 OR1L3Q8NH93 324 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 CXCL13O43927 109 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF780AO75290 641 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-216ENST00000639300 SNRNP70P08621 437 aaKnown RBP13.03□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF728P0DKX0 622 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 PLA2G7Q13093 441 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 PCK2Q16822 640 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 DOK3Q7L591 496 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 OTOSQ8NHW6 89 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 OR8B4Q96RC9 309 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 FLRT3Q9NZU0 649 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 M0R135 149 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 ITGB2P05107 769 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 GIPP09681 153 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-216ENST00000639300 IL10RAQ13651 578 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 RAB11FIP2Q7L804 512 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF799Q96GE5 643 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF681Q96N22 645 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 BARHL1Q9BZE3 327 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 RNF32Q9H0A6 362 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 WNK3Q9BYP7 1800 aa13.03□□□□□ -0.32
SCARB2-216ENST00000639300 ICMTO60725 284 aa13.02□□□□□ -0.32
SCARB2-216ENST00000639300 GNB3P16520 340 aa13.02□□□□□ -0.32
SCARB2-216ENST00000639300 THEM4Q5T1C6 240 aa13.02□□□□□ -0.32
SCARB2-216ENST00000639300 TMEM71Q6P5X7 295 aa13.02□□□□□ -0.32
SCARB2-216ENST00000639300 NAXDQ8IW45 347 aa13.02□□□□□ -0.32
SCARB2-216ENST00000639300 DND1Q8IYX4 353 aaKnown RBP13.02□□□□□ -0.32
SCARB2-216ENST00000639300 RBPMSQ93062 196 aaKnown RBP13.02□□□□□ -0.32
SCARB2-216ENST00000639300 PARP12Q9H0J9 701 aaKnown RBP13.02□□□□□ -0.32
SCARB2-216ENST00000639300 R4GMQ9 66 aa13.02□□□□□ -0.32
SCARB2-216ENST00000639300 THOC3Q96J01 351 aaKnown RBP13.02□□□□□ -0.33
SCARB2-216ENST00000639300 ZCCHC4Q9H5U6 513 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 C1orf123Q9NWV4 160 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 PARP14Q460N5 1801 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 C1orf196B1AJZ1 125 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 TBXA2RP21731 343 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 CLINT1Q14677 625 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 WDR38Q5JTN6 314 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 LAIR1Q6GTX8 287 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 RELL2Q8NC24 303 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-216ENST00000639300 TMEM52Q8NDY8 209 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 OR2AK2Q8NG84 335 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 C11orf40Q8WZ69 217 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 WFDC6Q9BQY6 131 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 LRFN1Q9P244 771 aa13.02□□□□□ -0.33
SCARB2-216ENST00000639300 PHF1O43189 567 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-216ENST00000639300 VAMP5O95183 116 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 POU3F3P20264 500 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-216ENST00000639300 MMP15P51511 669 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 BAMBIQ13145 260 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 SEMA6DQ8NFY4 1073 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 OR4S1Q8NGB4 309 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 PBOV1Q9GZY1 135 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 SCPEP1Q9HB40 452 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 GDF2Q9UK05 429 aaPredicted RBP13.01□□□□□ -0.33
SCARB2-216ENST00000639300 TRAPPC2LQ9UL33 140 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 NBASA2RRP1 2371 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 PYCARD-AS1I3L0S3 204 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 WNT1P04628 370 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 CD226Q15762 336 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 PRSS53Q2L4Q9 553 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 VHLLQ6RSH7 139 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 ARPC5LQ9BPX5 153 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 CCL7P80098 99 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 TAS2R5Q9NYW4 299 aa13.01□□□□□ -0.33
SCARB2-216ENST00000639300 EDARQ9UNE0 448 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms