RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CHST2Q9Y4C5 530 aa3.91□□□□□ -1.78
SCN3A-209ENST00000639244 IGHV2OR16-5A0A0B4J2B6 119 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 TTC24A2A3L6 582 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-209ENST00000639244 TNFSF14O43557 240 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 FOXH1O75593 365 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 OR2F2O95006 317 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 MMP7P09237 267 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-209ENST00000639244 ADRA1AP35348 466 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CFHR2P36980 270 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 AMTP48728 403 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SULT1A1P50225 295 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SYTL3Q4VX76 610 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 MORN2Q502X0 79 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 ARL13AQ5H913 290 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SHC4Q6S5L8 630 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 OTOP2Q7RTS6 562 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 TCTEX1D1Q8N7M0 179 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SLCO4A1Q96BD0 722 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 GALNT14Q96FL9 552 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 MARK4Q96L34 752 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 MRGPRX2Q96LB1 330 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CSF3RQ99062 836 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 ZBTB26Q9HCK0 441 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 RGPD1P0DJD0 1748 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 TYROBPO43914 113 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SULT1A3P0DMM9 295 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SULT1A4P0DMN0 295 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 AVPR1AP37288 418 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 TAF6P49848 677 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SNRNP35Q16560 246 aaKnown RBP3.9□□□□□ -1.78
SCN3A-209ENST00000639244 NKPD1Q17RQ9 610 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF766Q5HY98 468 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 C22orf42Q6IC83 251 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SLCO4C1Q6ZQN7 724 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CILP2Q8IUL8 1156 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 KLHDC1Q8N7A1 406 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 METTL17Q9H7H0 456 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-209ENST00000639244 HEYLQ9NQ87 328 aaPredicted RBP3.9□□□□□ -1.78
SCN3A-209ENST00000639244 PIGVQ9NUD9 493 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 DUS2Q9NX74 493 aaKnown RBP3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CMAHPQ9Y471 501 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 PRSS21Q9Y6M0 314 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 DENND4CQ5VZ89 1909 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 FOCADQ5VW36 1801 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 OR2A25A4D2G3 310 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SYNGR3O43761 229 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 OR2C1O95371 312 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 ADRA2AP08913 450 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CT45A8P0DMV1 189 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CT45A9P0DMV2 189 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 MPZP25189 248 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 VAMP7P51809 220 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 FBXW4P57775 412 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 AKR1C1Q04828 323 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 TEAD2Q15562 447 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CT45A2Q5DJT8 189 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 GJB7Q6PEY0 223 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 YAF2Q8IY57 180 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CDRT4Q8N9R6 151 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 FAM110BQ8TC76 370 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 SUSD6Q92537 303 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CTDSP1Q9GZU7 261 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 RNF167Q9H6Y7 350 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 TXNRD2Q9NNW7 524 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 CLN8Q9UBY8 286 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 UQCR10Q9UDW1 63 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 B3GALT5Q9Y2C3 310 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 FAM186AA6NE01 2351 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 MED13Q9UHV7 2174 aa3.9□□□□□ -1.78
SCN3A-209ENST00000639244 FXYD6-FXYD2A0A087WZ82 144 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 HEPACAM2A8MVW5 462 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 MGMTP16455 207 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 NTSR1P30989 418 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 PSEN2P49810 448 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 BACE1P56817 501 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 MLLT11Q13015 90 aaPredicted RBP3.9□□□□□ -1.79
SCN3A-209ENST00000639244 C1DQ13901 141 aaKnown RBP3.9□□□□□ -1.79
SCN3A-209ENST00000639244 RBM39Q14498 530 aaKnown RBP3.9□□□□□ -1.79
SCN3A-209ENST00000639244 C1orf194Q5T5A4 169 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 TMEM244Q5VVB8 128 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 RPL22L1Q6P5R6 122 aaKnown RBP3.9□□□□□ -1.79
SCN3A-209ENST00000639244 KIRREL2Q6UWL6 708 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 SPPL2CQ8IUH8 684 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 BEST3Q8N1M1 668 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 PNPLA1Q8N8W4 532 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 KREMEN2Q8NCW0 462 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 SH3RF2Q8TEC5 729 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 EMG1Q92979 244 aaKnown RBP3.9□□□□□ -1.79
SCN3A-209ENST00000639244 GALMQ96C23 342 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 SEPHS2Q99611 448 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 DERL1Q9BUN8 251 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 FXYD6Q9H0Q3 95 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 UQCC1Q9NVA1 299 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 CSDC2Q9Y534 153 aaKnown RBP3.9□□□□□ -1.79
SCN3A-209ENST00000639244 UBIAD1Q9Y5Z9 338 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 KIAA0556O60303 1618 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 CRB1P82279 1406 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 F5H5T6 163 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 SLC37A4O43826 429 aa3.9□□□□□ -1.79
SCN3A-209ENST00000639244 CREBL2O60519 120 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms