RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 DIMT1Q9UNQ2 313 aaKnown RBP5.85□□□□□ -1.47
UPF3B-205ENST00000636792 EXOSC1Q9Y3B2 195 aaKnown RBP5.85□□□□□ -1.47
UPF3B-205ENST00000636792 LHFPL6Q9Y693 200 aa5.85□□□□□ -1.47
UPF3B-205ENST00000636792 UBR5O95071 2799 aaPredicted RBP5.85□□□□□ -1.47
UPF3B-205ENST00000636792 LOC100289279A0A1B0GTE1 492 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 NKX2-6A6NCS4 301 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 J3QRE1 110 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 M0R129 80 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF593O00488 134 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CASKO14936 926 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SYNGR3O43761 229 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 FAM20BO75063 409 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 TNFAIP8O95379 198 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CLIC3O95833 236 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CRYAAP02489 173 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SPARCP09486 303 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 TACSTD2P09758 323 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CD79AP11912 226 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF32P17041 273 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 MYL12AP19105 171 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CRHBPP24387 322 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CDAP32320 146 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 APLNRP35414 380 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 KIR2DL3P43628 341 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 FOXG1P55316 489 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 TAS2R43P59537 309 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SLC35A2P78381 396 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 BDH1Q02338 343 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 MVKQ03426 396 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SRSF1Q07955 248 aaKnown RBP eCLIP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 GALEQ14376 348 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 DAZAP2Q15038 168 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 TBCEQ15813 527 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF829Q3KNS6 432 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 KRTAP27-1Q3LI81 207 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 HIKESHIQ53FT3 197 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF544Q6NX49 715 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 DRAM2Q6UX65 266 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 PLEKHG7Q6ZR37 379 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 DPY19L4Q7Z388 723 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 FAM220AQ7Z4H9 259 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 DCXRQ7Z4W1 244 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SKA3Q8IX90 412 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF679Q8IYX0 411 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 WDR31Q8NA23 367 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ZNF540Q8NDQ6 660 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CCDC54Q8NEL0 328 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 OR4F15Q8NGB8 312 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 OR51G2Q8NGK0 314 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 OR52N1Q8NH53 320 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 FCGR1BQ92637 280 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 THRSPQ92748 146 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SPTSSAQ969W0 71 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SLAMF6Q96DU3 332 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ZMYND19Q96E35 227 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 RNFT2Q96EX2 444 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CNBD2Q96M20 576 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 OR8B4Q96RC9 309 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 NR1H4Q96RI1 486 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 SIGLEC11Q96RL6 698 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 KCNS3Q9BQ31 491 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 COPS4Q9BT78 406 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CDCA4Q9BXL8 241 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 MROQ9BYG7 248 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 BCL2L14Q9BZR8 327 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 OR2H1Q9GZK4 316 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 RNF121Q9H920 327 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 MED20Q9H944 212 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 ELOVL3Q9HB03 270 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CHCHD3Q9NX63 227 aaKnown RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 PSORS1C1Q9UIG5 152 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 CAB39Q9Y376 341 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 PCDHGB5Q9Y5G0 923 aa5.84□□□□□ -1.47
UPF3B-205ENST00000636792 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.84□□□□□ -1.47
UPF3B-205ENST00000636792 HEATR1Q9H583 2144 aaKnown RBP5.83□□□□□ -1.48
UPF3B-205ENST00000636792 TMEM129A0AVI4 362 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 DAPL1A0PJW8 107 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 TRIM64A6NGJ6 449 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 PRSS44E7EML9 344 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 EIF4EBP3O60516 100 aaPredicted RBP5.83□□□□□ -1.48
UPF3B-205ENST00000636792 SELENOFO60613 162 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 SEC14L2O76054 403 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 HLA-HP01893 362 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 KRT8P05787 483 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 CFL1P23528 166 aaKnown RBP5.83□□□□□ -1.48
UPF3B-205ENST00000636792 STOMP27105 288 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 HSD11B1P28845 292 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 OPRL1P41146 370 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 NAA10P41227 235 aaPredicted RBP5.83□□□□□ -1.48
UPF3B-205ENST00000636792 HTR5AP47898 357 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 GDI2P50395 445 aaKnown RBP5.83□□□□□ -1.48
UPF3B-205ENST00000636792 RIDAP52758 137 aaKnown RBP5.83□□□□□ -1.48
UPF3B-205ENST00000636792 TPTEP56180 551 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 PSG4Q00888 419 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 NAAAQ02083 359 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 EIF2B1Q14232 305 aaKnown RBP5.83□□□□□ -1.48
UPF3B-205ENST00000636792 SWI5Q1ZZU3 235 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 CDONQ4KMG0 1287 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 CCDC58Q4VC31 144 aa5.83□□□□□ -1.48
UPF3B-205ENST00000636792 PABPC1L2AQ5JQF8 200 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms