RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 KLF9Q13886 244 aaPredicted RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 PHYHD1Q5SRE7 291 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 SPINK14Q6IE38 97 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 PRSS45Q7RTY3 260 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 GLCCI1Q86VQ1 547 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 SIAH3Q8IW03 269 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 NKAIN3Q8N8D7 197 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 OR6F1Q8NGZ6 308 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 FAM3DQ96BQ1 224 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 UPRTQ96BW1 309 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 B4GALT7Q9UBV7 327 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 PCNX2A6NKB5 2137 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 KRT33AO76009 404 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 ECDO95905 644 aaPredicted RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 POU3F2P20265 443 aaPredicted RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 DDOSTP39656 456 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 SRP9P49458 86 aaKnown RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 SGCAQ16586 387 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 PDSS1Q5T2R2 415 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 ABLIM2Q6H8Q1 611 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 SERPINA12Q8IW75 414 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 OR51D1Q8NGF3 324 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 OR6M1Q8NGM8 313 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 FCAMRQ8WWV6 532 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 SLC25A28Q96A46 364 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 FOXRED1Q96CU9 486 aaPredicted RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 SIGLEC12Q96PQ1 595 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 ZNF416Q9BWM5 594 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 DPAGT1Q9H3H5 408 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 DDX28Q9NUL7 540 aaKnown RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 COPZ2Q9P299 210 aa19.51■□□□□ 0.71
PNKP-220ENST00000627232 RBMX2Q9Y388 322 aaKnown RBP19.51■□□□□ 0.71
PNKP-220ENST00000627232 ZNF716A6NP11 495 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 XRCC3O43542 346 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 SYT7O43581 403 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 GLSO94925 669 aaPredicted RBP19.5■□□□□ 0.71
PNKP-220ENST00000627232 HPNP05981 417 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 GDNFP39905 211 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 POU3F4P49335 361 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 ZNF84P51523 738 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 CAPZA1P52907 286 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 TAS2R20P59543 309 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 HIST1H3AP68431 136 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 TATDN3Q17R31 274 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 C2orf76Q3KRA6 126 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 RNASE12Q5GAN4 147 aaKnown RBP19.5■□□□□ 0.71
PNKP-220ENST00000627232 C1orf100Q5SVJ3 147 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 HIST2H3PS2Q5TEC6 136 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 ANKRD16Q6P6B7 361 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 HIST2H3AQ71DI3 136 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 IL22RA1Q8N6P7 574 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 AUNIPQ9H7T9 357 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 ZNF221Q9UK13 617 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 FLVCR1Q9Y5Y0 555 aa19.5■□□□□ 0.71
PNKP-220ENST00000627232 SPEGQ15772 3267 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 WDR87Q6ZQQ6 2873 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 A0A1B0GVI7 797 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 LOC390937A0A1W2PQ73 354 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 INMT-MINDY4F8WBC2 141 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 ACOT7O00154 380 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 RER1O15258 196 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 CXCL13O43927 109 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 HTR2CP28335 458 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 SELENOPP49908 381 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 AP3S2P59780 193 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 ENDOGQ14249 297 aaKnown RBP19.49■□□□□ 0.71
PNKP-220ENST00000627232 OR1C1Q15619 314 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 DNM1P46Q6ZS02 220 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 GJC3Q8NFK1 279 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 OR10D3Q8NH80 312 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 SLC7A6Q92536 515 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 NABP1Q96AH0 204 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 ULBP2Q9BZM5 246 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 DIABLOQ9NR28 239 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 NUBP2Q9Y5Y2 271 aa19.49■□□□□ 0.71
PNKP-220ENST00000627232 DOK2O60496 412 aa19.48■□□□□ 0.71
PNKP-220ENST00000627232 F10P00742 488 aa19.48■□□□□ 0.71
PNKP-220ENST00000627232 MRPS34P82930 218 aaKnown RBP19.48■□□□□ 0.71
PNKP-220ENST00000627232 LUZP2Q86TE4 346 aa19.48■□□□□ 0.71
PNKP-220ENST00000627232 PLPP7Q8NBV4 271 aa19.48■□□□□ 0.71
PNKP-220ENST00000627232 CLEC1AQ8NC01 280 aa19.48■□□□□ 0.71
PNKP-220ENST00000627232 OR52I2Q8NH67 350 aa19.48■□□□□ 0.71
PNKP-220ENST00000627232 CPNE4Q96A23 557 aaPredicted RBP19.48■□□□□ 0.71
PNKP-220ENST00000627232 ZNF703Q9H7S9 590 aaPredicted RBP19.48■□□□□ 0.71
PNKP-220ENST00000627232 ALG5Q9Y673 324 aa19.48■□□□□ 0.71
PNKP-220ENST00000627232 A0A1B0GTI1 187 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 NAP1L6A6NFF2 107 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 CTAG2O75638 210 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 GSTT2BP0CG30 244 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 CX3CR1P49238 355 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 STARP49675 285 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 ZNF121P58317 390 aaPredicted RBP19.47■□□□□ 0.71
PNKP-220ENST00000627232 LYPD6Q86Y78 171 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 DEFB124Q8NES8 71 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 UBASH3BQ8TF42 649 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 FGGYQ96C11 551 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 ST6GAL2Q96JF0 529 aa19.47■□□□□ 0.71
PNKP-220ENST00000627232 TMEM272A0A1B0GTI8 110 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 LMX1BO60663 402 aa19.46■□□□□ 0.71
PNKP-220ENST00000627232 FTH1P19P0C7X4 201 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms