RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 SIRT6Q8N6T7 355 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 OR52L1Q8NGH7 329 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 OR8D4Q8NGM9 314 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 NEIL3Q8TAT5 605 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 C11orf54Q9H0W9 315 aaPredicted RBP10.38□□□□□ -0.75
LINC00538-201ENST00000626109 COMMD3Q9UBI1 195 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 UPB1Q9UBR1 384 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF443Q9Y2A4 671 aaPredicted RBP10.38□□□□□ -0.75
LINC00538-201ENST00000626109 WDR45Q9Y484 360 aa10.38□□□□□ -0.75
LINC00538-201ENST00000626109 FAM25AB3EWG3 89 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 FAM25CB3EWG5 89 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 FAM25GB3EWG6 89 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TFECO14948 347 aaPredicted RBP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 FCMRO60667 390 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 GLCEO94923 617 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 IGHA1P01876 353 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 LIFP15018 202 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 CELP19835 753 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 MSX1P28360 303 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TGM4P49221 684 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 EFNA3P52797 238 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 LSM11P83369 360 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 IFITM2Q01629 132 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 FAM69BQ5VUD6 431 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF620Q6ZNG0 422 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ANKRD37Q7Z713 158 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 NRMQ8IXM6 262 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 Q8N402 240 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 LRRC17Q8N6Y2 441 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF485Q8NCK3 441 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 KCNG3Q8TAE7 436 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ST6GAL2Q96JF0 529 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TAAR6Q96RI8 345 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 DIRC2Q96SL1 478 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 CHRDL1Q9BU40 450 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 FN3KQ9H479 309 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TMEM231Q9H6L2 316 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ADAP2Q9NPF8 381 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 GDF2Q9UK05 429 aaPredicted RBP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 RASD1Q9Y272 281 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 A0A1W2PS29 197 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 MED19A0JLT2 244 aaPredicted RBP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ATP6V1G2-DDX39BF2Z307 99 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TRIM77I1YAP6 450 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ADAP1O75689 374 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 DFFBO76075 338 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 HLA-DQB1P01920 261 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ATP1B1P05026 303 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 BMP7P18075 431 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 MAP2K3P46734 347 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 EVX1P49640 407 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 DUSP2Q05923 314 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 DUSP8Q13202 625 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 CDK10Q15131 360 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TRAM1Q15629 374 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ELAVL1Q15717 326 aaKnown RBP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 MFSD12Q6NUT3 480 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TMEM205Q6UW68 189 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 LANCL3Q6ZV70 420 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ATP6V1C2Q8NEY4 427 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 AKAP1Q92667 903 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ZG16BQ96DA0 208 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 ZC3HAV1LQ96H79 300 aaKnown RBP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 TMED9Q9BVK6 235 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 MMP28Q9H239 520 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 INPP5EQ9NRR6 644 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 IL17BQ9UHF5 180 aa10.37□□□□□ -0.75
LINC00538-201ENST00000626109 MRPS18BQ9Y676 258 aaKnown RBP10.37□□□□□ -0.75
LINC00538-201ENST00000626109 C13orf42A0A1B0GVH6 325 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 TRAPPC13A5PLN9 417 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 UNC119BA6NIH7 251 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 B4DXG7 233 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 F2RL2O00254 374 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 GABRPO00591 440 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 SEC16AO15027 2179 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 RGS9O75916 674 aaPredicted RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 RCBTB2O95199 551 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 DBIP07108 87 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 F2RL1P55085 397 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 PCOLCEQ15113 449 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 TESK1Q15569 626 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 TMEM211Q6ICI0 200 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 CNIH2Q6PI25 160 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 ZNF322Q6U7Q0 402 aaPredicted RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 FRRS1Q6ZNA5 592 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 CXXC5Q7LFL8 322 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 CPEB2Q7Z5Q1 589 aaKnown RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 LRRC75A-AS1Q8N1F1 130 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 ACBD7Q8N6N7 88 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 ARIH2OSQ8N7S6 290 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 OR4F15Q8NGB8 312 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 OR13C9Q8NGT0 318 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 OR4Q3Q8NH05 313 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 SPRYD4Q8WW59 207 aaPredicted RBP10.36□□□□□ -0.75
LINC00538-201ENST00000626109 SLC7A6Q92536 515 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 RIT1Q92963 219 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 DUX5Q96PT3 197 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 ATF6BQ99941 703 aa10.36□□□□□ -0.75
LINC00538-201ENST00000626109 SOSTQ9BQB4 213 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms