RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 RAC2P15153 192 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 IDH3AP50213 366 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 RPL15P61313 204 aaKnown RBP12.2□□□□□ -0.46
PNKP-218ENST00000625299 PIN1Q13526 163 aaPredicted RBP12.2□□□□□ -0.46
PNKP-218ENST00000625299 WDR93Q6P2C0 686 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 SCCPDHQ8NBX0 429 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
PNKP-218ENST00000625299 ACOXLQ9NUZ1 547 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 RIMS3Q9UJD0 308 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 HIF3AQ9Y2N7 669 aa12.2□□□□□ -0.46
PNKP-218ENST00000625299 TET2Q6N021 2002 aaPredicted RBP12.2□□□□□ -0.46
PNKP-218ENST00000625299 A6NIZ1 184 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 ZNF879B4DU55 563 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 PIN1P1O15428 100 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 MLNRO43193 412 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 OR5F1O95221 314 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 CSF1P09603 554 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 IFI30P13284 250 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 PMELP40967 661 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 RAP1BP61224 184 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 RAP1AP62834 184 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 INTS11Q5TA45 600 aaKnown RBP12.19□□□□□ -0.46
PNKP-218ENST00000625299 DCDC5Q6ZRR9 648 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 PDZD9Q8IXQ8 264 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 OR51A7Q8NH64 312 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 OR10A6Q8NH74 314 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 RASSF5Q8WWW0 418 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 LIPHQ8WWY8 451 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 LHX4Q969G2 390 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 TBX15Q96SF7 602 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 CGREF1Q99674 301 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 TRIM15Q9C019 465 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 TMCC3Q9ULS5 477 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 NBEAL2Q6ZNJ1 2754 aa12.19□□□□□ -0.46
PNKP-218ENST00000625299 TRAV27A0A087WT01 109 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 A0A0U1RQK1 487 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 FBP2O00757 339 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 IGF2P01344 180 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 HLA-DPB1P04440 258 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 DBHP09172 617 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 CRYBA2P53672 197 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 PRSS12P56730 875 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 HOXA4Q00056 320 aaPredicted RBP12.18□□□□□ -0.46
PNKP-218ENST00000625299 METTL11BQ5VVY1 283 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 ZNF841Q6ZN19 808 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 Q6ZSV7 163 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 OR5L1Q8NGL2 311 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 C10orf82Q8WW14 230 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 RERGLQ9H628 205 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 WDR76Q9H967 626 aa12.18□□□□□ -0.46
PNKP-218ENST00000625299 IGHV1-69DA0A0B4J2H0 117 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 ANGPT2O15123 496 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 IGHV1-69P01742 117 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 FPR3P25089 353 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 OR1E2P47887 323 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 MAGOHP61326 146 aaKnown RBP12.17□□□□□ -0.46
PNKP-218ENST00000625299 AQP6Q13520 282 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 NFYCQ13952 458 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 FAM189A2Q15884 450 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 ZNF181Q2M3W8 571 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 BEAN1Q3B7T3 259 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 CD276Q5ZPR3 534 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
PNKP-218ENST00000625299 FBXW12Q6X9E4 464 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 CROCCP2Q86T23 111 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 BOLLQ8N9W6 283 aaKnown RBP12.17□□□□□ -0.46
PNKP-218ENST00000625299 OR11L1Q8NGX0 322 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 RASD2Q96D21 266 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 BPIFA2Q96DR5 249 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 WDFY2Q96P53 400 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 WACQ9BTA9 647 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 CCDC28BQ9BUN5 200 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 KAT8Q9H7Z6 458 aaKnown RBP12.17□□□□□ -0.46
PNKP-218ENST00000625299 UFSP2Q9NUQ7 469 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 ERVK-18Q9QC07 812 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 BAG5Q9UL15 447 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 NDUFAF1Q9Y375 327 aa12.17□□□□□ -0.46
PNKP-218ENST00000625299 ELOVL7A1L3X0 281 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 FAM20BO75063 409 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 MMP9P14780 707 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 PSMB10P40306 273 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 IER3P46695 156 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 RGS6P49758 472 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 NPY4RP50391 375 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 EGR3Q06889 387 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 VMACQ2NL98 169 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 PRAMEF6Q5VXH4 476 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 SFRP4Q6FHJ7 346 aaPredicted RBP12.16□□□□□ -0.46
PNKP-218ENST00000625299 GDPGP1Q6ZNW5 385 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 Q6ZPA2 131 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.16□□□□□ -0.46
PNKP-218ENST00000625299 LRRC75AQ8NAA5 344 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 ZSCAN4Q8NAM6 433 aaPredicted RBP12.16□□□□□ -0.46
PNKP-218ENST00000625299 PCYOX1LQ8NBM8 494 aa12.16□□□□□ -0.46
PNKP-218ENST00000625299 POLR2J2Q9GZM3 115 aaKnown RBP12.16□□□□□ -0.46
PNKP-218ENST00000625299 POLR2J3Q9H1A7 115 aaKnown RBP12.16□□□□□ -0.46
PNKP-218ENST00000625299 TMEM100Q9NV29 134 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms