RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 ZNF679Q8IYX0 411 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ZNF615Q8N8J6 731 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 AVL9Q8NBF6 648 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 ADAMTS18Q8TE60 1221 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 GTF3AQ92664 365 aaKnown RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 FBXO17Q96EF6 278 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 VRK1Q99986 396 aaPredicted RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 SEC11CQ9BY50 192 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 RNF122Q9H9V4 155 aa7.83□□□□□ -1.16
VCL-207ENST00000624354 METTL1Q9UBP6 276 aaKnown RBP7.83□□□□□ -1.16
VCL-207ENST00000624354 OR6C76A6NM76 312 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 OR2F2O95006 317 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 CD8AP01732 235 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 AKT2P31751 481 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 OR2F1Q13607 317 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 CDNFQ49AH0 187 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 TMEM31Q5JXX7 168 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 TMEM225Q6GV28 225 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 FAM166AQ6J272 317 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 SLC18B1Q6NT16 456 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 Q6ZSR6 202 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 GALNT16Q8N428 558 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ARHGEF39Q8N4T4 335 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ZNF561Q8N587 486 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 C19orf47Q8N9M1 422 aaKnown RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 OR5M8Q8NGP6 311 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 RNF128Q8TEB7 428 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 METTL21AQ8WXB1 218 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 TAAR8Q969N4 342 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 SPSB2Q99619 263 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 NKX3-1Q99801 234 aaPredicted RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 NOP16Q9Y3C1 178 aaKnown RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 A0A1B0GV90 55 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ZNF736B4DX44 427 aaPredicted RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 C11orf98E9PRG8 122 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 LY86O95711 162 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ACTL6AO96019 429 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 CD34P28906 385 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 EIF2S3P41091 472 aaKnown RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 PNLIPRP2P54317 469 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 PRTGQ2VWP7 1150 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 SCGB2B2Q4G0G5 96 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 GLYATL3Q5SZD4 288 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 OTPQ5XKR4 325 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 KCTD18Q6PI47 426 aaPredicted RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 PARM1Q6UWI2 310 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 NDUFAF7Q7L592 441 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 SSX9Q7RTT3 188 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 NUP54Q7Z3B4 507 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 GTPBP8Q8N3Z3 284 aaPredicted RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 BPIFB2Q8N4F0 458 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ZNF565Q8N9K5 539 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 GPBAR1Q8TDU6 330 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 PAQR8Q8TEZ7 354 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 FGF14Q92915 247 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ZNF587Q96SQ5 575 aaPredicted RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 TMEM231Q9H6L2 316 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 MYOZ1Q9NP98 299 aaPredicted RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 SMCO4Q9NRQ5 59 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ZNF230Q9UIE0 474 aaPredicted RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 FARSAQ9Y285 508 aaKnown RBP7.82□□□□□ -1.16
VCL-207ENST00000624354 CLDN16Q9Y5I7 305 aa7.82□□□□□ -1.16
VCL-207ENST00000624354 ARGFXA6NJG6 315 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZNF705EA8MWA4 302 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 F5H0A9 414 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 CLN5O75503 358 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 FARS2O95363 451 aaKnown RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 CD63P08962 238 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 SPARCP09486 303 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZNF44P15621 663 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZNF14P17017 642 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 CXCR1P25024 350 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 RAB2AP61019 212 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 SRSF3P84103 164 aaKnown RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 HHEXQ03014 270 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 DHRS2Q13268 280 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ZNF345Q14585 488 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 TAF13Q15543 124 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 LRRC37A5PQ49AS3 106 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 FAM76BQ5HYJ3 339 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 ATPAF1Q5TC12 328 aaPredicted RBP7.81□□□□□ -1.16
VCL-207ENST00000624354 C11orf87Q6NUJ2 197 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 POMZP3Q6PJE2 187 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 OR1J2Q8NGS2 313 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 OIT3Q8WWZ8 545 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 DNAJA3Q96EY1 480 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 C14orf79Q96F83 325 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 SLC41A2Q96JW4 573 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 FOXN4Q96NZ1 517 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 EDEM2Q9BV94 578 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 UCK1Q9HA47 277 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 DZANK1Q9NVP4 752 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 TREM2Q9NZC2 230 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 B9D1Q9UPM9 204 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 OR2AT4A6NND4 320 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 GPR37O15354 613 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 GMFGO60234 142 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 FADS1O60427 444 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 UTS2O95399 124 aa7.81□□□□□ -1.16
VCL-207ENST00000624354 IL33O95760 270 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms