RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 ZNF860A6NHJ4 632 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 A6NIZ1 184 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 VSTM2BA6NLU5 285 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 GJE1A6NN92 205 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ZNF670-ZNF695F2Z2N8 137 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 BLOC1S5-TXNDC5H3BN57 136 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 DLGAP1O14490 977 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 IMPA2O14732 288 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ZNF264O43296 627 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 SSX4O60224 188 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 CDC40O60508 579 aaKnown RBP eCLIP3.6□□□□□ -1.83
ATRX-209ENST00000623242 SCRG1O75711 98 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ZFAND5O76080 213 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 KCNK2O95069 426 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 GABARAPO95166 117 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 SOX14O95416 240 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 AHSA1O95433 338 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 MT-ATP6P00846 226 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 MT-ND2P03891 347 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 SNRNP70P08621 437 aaKnown RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 GSTT2BP0CG30 244 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 SMIM10L1P0DMW3 83 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 CD1EP15812 388 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ZNF823P16415 610 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 C4BPBP20851 252 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 CSRP1P21291 193 aaKnown RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 CPT2P23786 658 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PTBP1P26599 531 aaKnown RBP eCLIP3.6□□□□□ -1.836e-11■■■■□ 26
ATRX-209ENST00000623242 HTR1FP30939 366 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 MC5RP33032 325 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 MMP15P51511 669 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PDX1P52945 283 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 RAP1BP61224 184 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 LSM3P62310 102 aaKnown RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 RAP1AP62834 184 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PPP3R1P63098 170 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PRKCDQ05655 676 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 C17orf67Q0P5P2 114 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ISXQ2M1V0 245 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 SLC35D3Q5M8T2 416 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 CLEC12AQ5QGZ9 265 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PDSS1Q5T2R2 415 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 MRPL2Q5T653 305 aaKnown RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 C1orf189Q5VU69 101 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 DPY19L2P2Q6ZN68 376 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PRSS42Q7Z5A4 293 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 NANOGNBQ7Z5D8 188 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 VN1R4Q7Z5H5 301 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 LUZP2Q86TE4 346 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 VRK2Q86Y07 508 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 NRMQ8IXM6 262 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 METTL27Q8N6F8 245 aaPredicted RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 OR7G2Q8NG99 324 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 OR10H4Q8NGA5 316 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 OR4C15Q8NGM1 316 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 OR6T1Q8NGN1 323 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 OR2T4Q8NH00 348 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 OR52N1Q8NH53 320 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 FNDC8Q8TC99 324 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 GRHL3Q8TE85 626 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ASB17Q8WXJ9 295 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 EFHD2Q96C19 240 aaPredicted RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 SMIM10Q96HG1 83 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ZNF681Q96N22 645 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ERMAPQ96PL5 475 aaPredicted RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 DUX5Q96PT3 197 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 SECISBP2Q96T21 854 aaKnown RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 CTRCQ99895 268 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 NIPSNAP1Q9BPW8 284 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 SLC30A2Q9BRI3 323 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 CCDC32Q9BV29 185 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ZNF350Q9GZX5 532 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 OR10A4Q9H209 315 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 DPAGT1Q9H3H5 408 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 C12orf10Q9HB07 376 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 FOLH1BQ9HBA9 442 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 AMBNQ9NP70 447 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 EXOSC3Q9NQT5 275 aaKnown RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 FGF21Q9NSA1 209 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 BABAM2Q9NXR7 383 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 IL20Q9NYY1 176 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PILRAQ9UKJ1 303 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 ACAD8Q9UKU7 415 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 PAIP2BQ9ULR5 123 aaKnown RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 ERVK-19Q9WJR5 959 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 U3KQA8 63 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 MN1Q10571 1320 aaPredicted RBP3.6□□□□□ -1.83
ATRX-209ENST00000623242 EML5Q05BV3 1969 aa3.6□□□□□ -1.83
ATRX-209ENST00000623242 GON4LQ3T8J9 2241 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 BPTFQ12830 3046 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 A0A087WUU8 490 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 A0A0B4J293 547 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 A8MXE2 369 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 WWP2O00308 870 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 NTN3O00634 580 aaPredicted RBP3.59□□□□□ -1.83
ATRX-209ENST00000623242 MAGEB3O15480 346 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 LRRTM2O43300 516 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 XRCC3O43542 346 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 RNF13O43567 381 aa3.59□□□□□ -1.83
ATRX-209ENST00000623242 HCRTR1O43613 425 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms