RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 FOXH1O75593 365 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 GPANK1O95872 356 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 IGHV2-70P01814 119 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 IFNGR2P38484 337 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 MEP1BQ16820 701 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 SAMD4BQ5PRF9 694 aaKnown RBP20.27■□□□□ 0.84
ATXN3-253ENST00000621269 USP43Q70EL4 1123 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 OR5AS1Q8N127 324 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 ZNF283Q8N7M2 679 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 ATG16L2Q8NAA4 619 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 ITLN1Q8WWA0 313 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 APOBEC3DQ96AK3 386 aaPredicted RBP20.27■□□□□ 0.84
ATXN3-253ENST00000621269 NSMCE2Q96MF7 247 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 IFT27Q9BW83 186 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 HDHD2Q9H0R4 259 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 OR52D1Q9H346 318 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 DCAF16Q9NXF7 216 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 TMCC3Q9ULS5 477 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 B9D1Q9UPM9 204 aa20.27■□□□□ 0.84
ATXN3-253ENST00000621269 SEMG1P04279 462 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 FABP3P05413 133 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 ADRA2CP18825 462 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 FPR3P25089 353 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 NOS3P29474 1203 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 ERFP50548 548 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 HNRNPA0Q13151 305 aaKnown RBP20.26■□□□□ 0.83
ATXN3-253ENST00000621269 HLXQ14774 488 aaPredicted RBP20.26■□□□□ 0.83
ATXN3-253ENST00000621269 SLC27A4Q6P1M0 643 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 C12orf54Q6X4T0 127 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 PGAM4Q8N0Y7 254 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 OR2V2Q96R30 315 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 JMJD8Q96S16 334 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 CDRT15Q96T59 188 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 NMNAT3Q96T66 252 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 COQ7Q99807 217 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 LHFPL6Q9Y693 200 aa20.26■□□□□ 0.83
ATXN3-253ENST00000621269 IGLV1-36A0A0B4J1U3 117 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 DCTN6O00399 190 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 ARPC3O15145 178 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 MSX2P35548 267 aaPredicted RBP20.25■□□□□ 0.83
ATXN3-253ENST00000621269 BTG1P62324 171 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 HIST1H3AP68431 136 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 TMEM155Q4W5P6 130 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 HIST2H3PS2Q5TEC6 136 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 FBXW12Q6X9E4 464 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 HIST2H3AQ71DI3 136 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 OR6V1Q8N148 313 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 OR4K13Q8NH42 304 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 ZNF582Q96NG8 517 aaPredicted RBP20.25■□□□□ 0.83
ATXN3-253ENST00000621269 CDADC1Q9BWV3 514 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 SUCNR1Q9BXA5 334 aa20.25■□□□□ 0.83
ATXN3-253ENST00000621269 PPIAL4EA0A075B759 164 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 PPIAL4CA0A0B4J2A2 164 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 PPIAL4DF5H284 164 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 TRIM77I1YAP6 450 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 ARPC2O15144 300 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 PPIAL4FP0DN26 164 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 HIST1H1CP16403 213 aaKnown RBP20.24■□□□□ 0.83
ATXN3-253ENST00000621269 RRM2P31350 389 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 HILS1P60008 231 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 ACTG1P63261 375 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 COX10Q12887 443 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 SLC36A3Q495N2 470 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 OR2T2Q6IF00 324 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 CORO6Q6QEF8 472 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 LRRC28Q86X40 367 aaPredicted RBP20.24■□□□□ 0.83
ATXN3-253ENST00000621269 BPIFB2Q8N4F0 458 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 OR8G5Q8NG78 346 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 OR2AJ1Q8NGZ0 328 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 OR13G1Q8NGZ3 307 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 PATZ1Q9HBE1 687 aaKnown RBP20.24■□□□□ 0.83
ATXN3-253ENST00000621269 RPRD1BQ9NQG5 326 aaKnown RBP20.24■□□□□ 0.83
ATXN3-253ENST00000621269 CD300AQ9UGN4 299 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 TAGLN3Q9UI15 199 aa20.24■□□□□ 0.83
ATXN3-253ENST00000621269 TANC2Q9HCD6 1990 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 IFNL4K9M1U5 179 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 IDH3BO43837 385 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 HLA-DQA2P01906 255 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 ZFP36P26651 326 aaKnown RBP20.23■□□□□ 0.83
ATXN3-253ENST00000621269 RBMXP38159 391 aaKnown RBP20.23■□□□□ 0.83
ATXN3-253ENST00000621269 ZMYND11Q15326 602 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 SLC26A10Q8NG04 563 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 GNPDA2Q8TDQ7 276 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 IL1RAPQ9NPH3 570 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 NDE1Q9NXR1 346 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 OPN4Q9UHM6 478 aa20.23■□□□□ 0.83
ATXN3-253ENST00000621269 SRP9P49458 86 aaKnown RBP20.22■□□□□ 0.83
ATXN3-253ENST00000621269 MXRA7P84157 204 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 C16orf89Q6UX73 402 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 OR10AD1Q8NGE0 317 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 SIGLEC11Q96RL6 698 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 PITX2Q99697 317 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 SLC6A7Q99884 636 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 HCAR1Q9BXC0 346 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 GCM1Q9NP62 436 aa20.22■□□□□ 0.83
ATXN3-253ENST00000621269 TMEM178BH3BS89 294 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 FPR2P25090 351 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 MDH2P40926 338 aaKnown RBP20.21■□□□□ 0.83
ATXN3-253ENST00000621269 SLC6A9P48067 706 aa20.21■□□□□ 0.83
ATXN3-253ENST00000621269 GSSP48637 474 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms