RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 SERPINA12Q8IW75 414 aa16.83■□□□□ 0.28
PSPC1-206ENST00000619300 GALNT16Q8N428 558 aa16.83■□□□□ 0.28
PSPC1-206ENST00000619300 HAVCR1Q96D42 359 aa16.83■□□□□ 0.28
PSPC1-206ENST00000619300 RNF121Q9H920 327 aa16.83■□□□□ 0.28
PSPC1-206ENST00000619300 DDX28Q9NUL7 540 aaKnown RBP16.83■□□□□ 0.28
PSPC1-206ENST00000619300 NPAP1Q9NZP6 1156 aa16.83■□□□□ 0.28
PSPC1-206ENST00000619300 NUFIP1Q9UHK0 495 aaKnown RBP16.83■□□□□ 0.28
PSPC1-206ENST00000619300 MEIOCA2RUB1 952 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 MEGF11A6BM72 1044 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 SLC17A2O00624 439 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 ITGA5P08648 1049 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 CD3GP09693 182 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 RFC3P40938 356 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 GPR176Q14439 515 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 PDSS1Q5T2R2 415 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 ATP1A1-AS1Q5TC04 95 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 GLT8D1Q68CQ7 371 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 LUZP2Q86TE4 346 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 AKAP14Q86UN6 197 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 ULBP2Q9BZM5 246 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 MOB1AQ9H8S9 216 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 ZNF275Q9NSD4 429 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-206ENST00000619300 RCE1Q9Y256 329 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 NCKAP5O14513 1909 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 CDK2AP1O14519 115 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 CD37P11049 281 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 ZNF84P51523 738 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 PRKXP51817 358 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 RAB11BQ15907 218 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 ABLIM2Q6H8Q1 611 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 FAM166AQ6J272 317 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 KRT74Q7RTS7 529 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 PRSS33Q8NF86 280 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 SMIM4Q8WVI0 70 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 CPNE4Q96A23 557 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-206ENST00000619300 NABP1Q96AH0 204 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 TTTY12Q9BZ98 90 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 NLKQ9UBE8 527 aa16.82■□□□□ 0.28
PSPC1-206ENST00000619300 CDV3Q9UKY7 258 aaKnown RBP16.82■□□□□ 0.28
PSPC1-206ENST00000619300 SYT7O43581 403 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 SULT1B1O43704 296 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 LMX1BO60663 402 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 SP1P08047 785 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 NTF4P34130 210 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 ENDOGQ14249 297 aaKnown RBP16.81■□□□□ 0.28
PSPC1-206ENST00000619300 PLPP7Q8NBV4 271 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 GJC3Q8NFK1 279 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 OR51D1Q8NGF3 324 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 CACNG2Q9Y698 323 aa16.81■□□□□ 0.28
PSPC1-206ENST00000619300 CELA3AP09093 270 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 CTSSP25774 331 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 PTH2RP49190 550 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 SRP9P49458 86 aaKnown RBP16.8■□□□□ 0.28
PSPC1-206ENST00000619300 TPTEP56180 551 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 GRB2P62993 217 aaKnown RBP16.8■□□□□ 0.28
PSPC1-206ENST00000619300 RNASE12Q5GAN4 147 aaKnown RBP16.8■□□□□ 0.28
PSPC1-206ENST00000619300 SLC25A25Q6KCM7 469 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 LINGO2Q7L985 606 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 GLCCI1Q86VQ1 547 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 TOMM5Q8N4H5 51 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 MDS2Q8NDY4 140 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 FAM3DQ96BQ1 224 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 FGGYQ96C11 551 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 OR5H15A6NDH6 313 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 ARGFXA6NJG6 315 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 A6NL46 340 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 CYTIPO60759 359 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 CDK2P24941 298 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 SLC6A1P30531 599 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 ZNF121P58317 390 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-206ENST00000619300 CBX3Q13185 183 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 C2orf76Q3KRA6 126 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 TMEM69Q5SWH9 247 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 RSBN1Q5VWQ0 802 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-206ENST00000619300 AAED1Q7RTV5 226 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 OR51A2Q8NGJ7 313 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 ZNF845Q96IR2 970 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-206ENST00000619300 ASCL3Q9NQ33 180 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 FAM86C1Q9NVL1 165 aa16.8■□□□□ 0.28
PSPC1-206ENST00000619300 KLF13Q9Y2Y9 288 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-206ENST00000619300 A0A1B0GTI1 187 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 FAM166BA8MTA8 275 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 NME2P1O60361 137 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 TPPPO94811 219 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 NME2P22392 152 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 MNDAP41218 407 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 MAGEA5P43359 124 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 CX3CR1P49238 355 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 POU3F4P49335 361 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 LHX2P50458 406 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 HIST1H3AP68431 136 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 MRPS34P82930 218 aaKnown RBP16.79■□□□□ 0.28
PSPC1-206ENST00000619300 PLGLB1Q02325 96 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 PLA2G7Q13093 441 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 HIST2H3PS2Q5TEC6 136 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 HIST2H3AQ71DI3 136 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 GALNTL5Q7Z4T8 443 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 LRRC18Q8N456 261 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 TMEM251Q8N6I4 163 aa16.79■□□□□ 0.28
PSPC1-206ENST00000619300 OR51E1Q8TCB6 317 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms