RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 SLX4IPQ5VYV7 408 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 C12orf73Q69YU5 71 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 CORO6Q6QEF8 472 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 ARL9Q6T311 187 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 LYPD4Q6UWN0 246 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 FBXW12Q6X9E4 464 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 AMIGO2Q86SJ2 522 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 ZDHHC13Q8IUH4 622 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 TIGD4Q8IY51 512 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 ZCCHC24Q8N2G6 241 aaKnown RBP7.05□□□□□ -1.28
NEK3-209ENST00000618856 ZNF786Q8N393 782 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 ZNF525Q8N782 197 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 PROKR2Q8NFJ6 384 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 OR9Q1Q8NGQ5 310 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 SLC25A40Q8TBP6 338 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 PYDC1Q8WXC3 89 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 SLC7A6Q92536 515 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 COG8Q96MW5 612 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 SYT3Q9BQG1 590 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 C1QTNF5Q9BXJ0 243 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 GABARAPL3Q9BY60 117 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 REG4Q9BYZ8 158 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 OR2J1Q9GZK6 312 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 POFUT1Q9H488 388 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 WDR76Q9H967 626 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 ELOVL3Q9HB03 270 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 HINT3Q9NQE9 182 aaKnown RBP7.05□□□□□ -1.28
NEK3-209ENST00000618856 SLCO1C1Q9NYB5 712 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 USE1Q9NZ43 259 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 EIF3KQ9UBQ5 218 aaKnown RBP7.05□□□□□ -1.28
NEK3-209ENST00000618856 CGGBP1Q9UFW8 167 aaPredicted RBP7.05□□□□□ -1.28
NEK3-209ENST00000618856 FZR1Q9UM11 496 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 STARD10Q9Y365 291 aa7.05□□□□□ -1.28
NEK3-209ENST00000618856 LOC390937A0A1W2PQ73 354 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 TVP23AA6NH52 213 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 FAM183AA6NL82 134 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 MITFO75030 526 aaPredicted RBP7.04□□□□□ -1.28
NEK3-209ENST00000618856 ABHD16AO95870 558 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 ALPLP05186 524 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 GYPBP06028 91 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 LCKP06239 509 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CD55P08174 381 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 SLC25A16P16260 332 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 ZNF823P16415 610 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CCNOP22674 350 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 FMO3P31513 532 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 LIPAP38571 399 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 ALDH3B1P43353 468 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 ENTPD1P49961 510 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 PPP1CBP62140 327 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CDK5R2Q13319 367 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 RIN1Q13671 783 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 MAD2L1BPQ15013 274 aaPredicted RBP7.04□□□□□ -1.28
NEK3-209ENST00000618856 PCGF3Q3KNV8 242 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 SLC35D3Q5M8T2 416 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 AADACL4Q5VUY2 407 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 TMEM236Q5W0B7 351 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CLEC2AQ6UVW9 174 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 LINC00346Q8IVM7 164 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 C10orf67Q8IYJ2 551 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 ZNF511Q8NB15 262 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 OR51L1Q8NGJ5 315 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 ABHD4Q8TB40 342 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 RNF133Q8WVZ7 376 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 APOBEC3DQ96AK3 386 aaPredicted RBP7.04□□□□□ -1.28
NEK3-209ENST00000618856 HAVCR1Q96D42 359 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CIB1Q99828 191 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 ATF6BQ99941 703 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 PKP2Q99959 881 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 VRK1Q99986 396 aaPredicted RBP7.04□□□□□ -1.28
NEK3-209ENST00000618856 RHNO1Q9BSD3 238 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 MED20Q9H944 212 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CYSLTR2Q9NS75 346 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 TAAR3PQ9P1P4 343 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 DUSP13Q9UII6 198 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 OAZ3Q9UMX2 235 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CHD3Q12873 2000 aaKnown RBP7.04□□□□□ -1.28
NEK3-209ENST00000618856 TLN2Q9Y4G6 2542 aa7.04□□□□□ -1.28
NEK3-209ENST00000618856 CR1P17927 2039 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 CCDC182A6NF36 153 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 RNF223E7ERA6 249 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 PRR23D1E9PI22 279 aaPredicted RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 ZNF593O00488 134 aaPredicted RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 PRKYO43930 277 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 RP2O75695 350 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 NCR1O76036 304 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 HPXP02790 462 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 HEXAP06865 529 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 TACSTD2P09758 323 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 PRR23D2P0DMB1 279 aaPredicted RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 NAT2P11245 290 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 DAOP14920 347 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 RAC2P15153 192 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 ZNF23P17027 643 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 PAICSP22234 425 aaKnown RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 POU1F1P28069 291 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 GSTT1P30711 240 aa7.03□□□□□ -1.28
NEK3-209ENST00000618856 RPS27P42677 84 aaKnown RBP7.03□□□□□ -1.28
NEK3-209ENST00000618856 NR4A2P43354 598 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms