RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 EGR3Q06889 387 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 RAB35Q15286 201 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 MED22Q15528 200 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 TAF13Q15543 124 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 TAB1Q15750 504 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 TBCEQ15813 527 aaPredicted RBP13.53□□□□□ -0.24
CCL3-206ENST00000614051 RSPO1Q2MKA7 263 aaPredicted RBP13.53□□□□□ -0.24
CCL3-206ENST00000614051 FBXL19-AS1Q494R0 122 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 KCTD18Q6PI47 426 aaPredicted RBP13.53□□□□□ -0.24
CCL3-206ENST00000614051 XKRXQ6PP77 449 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 ZNF584Q8IVC4 421 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 ZNF679Q8IYX0 411 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 C17orf78Q8N4C9 275 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 SVOPQ8N4V2 548 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 OR52N1Q8NH53 320 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 NANOS1Q8WY41 292 aaKnown RBP13.53□□□□□ -0.24
CCL3-206ENST00000614051 RNASE6Q93091 150 aaKnown RBP13.53□□□□□ -0.24
CCL3-206ENST00000614051 ZNF75AQ96N20 296 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 ATF6BQ99941 703 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 GRIP1Q9Y3R0 1128 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 SLC25A15Q9Y619 301 aa13.53□□□□□ -0.24
CCL3-206ENST00000614051 CLEC18AA5D8T8 446 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 OR6C6A6NF89 314 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 INMTO95050 263 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 CLDN14O95500 239 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 KRT8P05787 483 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 RNF224P0DH78 156 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 CCL2P13500 99 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 HTR5AP47898 357 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 GTF2A1P52655 376 aaPredicted RBP13.52□□□□□ -0.25
CCL3-206ENST00000614051 WNT4P56705 351 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 ACTA2P62736 377 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 ACTG2P63267 376 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 GALK2Q01415 458 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 TFF3Q07654 80 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 TIMM23BQ5SRD1 257 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 CLEC18BQ6UXF7 455 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 KLBQ86Z14 1044 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 CCDC36Q8IYA8 594 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 ADGRG4Q8IZF6 3080 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 ZNF808Q8N4W9 903 aaPredicted RBP13.52□□□□□ -0.25
CCL3-206ENST00000614051 CLEC18CQ8NCF0 446 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 OR1F12Q8NHA8 337 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 KCTD12Q96CX2 325 aaKnown RBP13.52□□□□□ -0.25
CCL3-206ENST00000614051 PELI1Q96FA3 418 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 ZC3HAV1LQ96H79 300 aaKnown RBP13.52□□□□□ -0.25
CCL3-206ENST00000614051 WACQ9BTA9 647 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 MROQ9BYG7 248 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 MRPS26Q9BYN8 205 aaKnown RBP13.52□□□□□ -0.25
CCL3-206ENST00000614051 AMDHD2Q9Y303 409 aa13.52□□□□□ -0.25
CCL3-206ENST00000614051 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 MT-ND5P03915 603 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 ANOS1P23352 680 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 IDH3GP51553 393 aaPredicted RBP13.51□□□□□ -0.25
CCL3-206ENST00000614051 PRKXP51817 358 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 PPA1Q15181 289 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 SPHARQ15513 63 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 LIPNQ5VXI9 398 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 DPPA2Q7Z7J5 298 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 NAA40Q86UY6 237 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.51□□□□□ -0.25
CCL3-206ENST00000614051 SYS1Q8N2H4 156 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 ZFP41Q8N8Y5 198 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 HSD17B8Q92506 261 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 MRPL48Q96GC5 212 aaKnown RBP13.51□□□□□ -0.25
CCL3-206ENST00000614051 HDHD2Q9H0R4 259 aa13.51□□□□□ -0.25
CCL3-206ENST00000614051 DDX28Q9NUL7 540 aaKnown RBP13.51□□□□□ -0.25
CCL3-206ENST00000614051 SIRT4Q9Y6E7 314 aaPredicted RBP13.51□□□□□ -0.25
CCL3-206ENST00000614051 F5H5K5 113 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 SULT1C4O75897 302 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 CLPTM1O96005 669 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 THBDP07204 575 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 HSMCR30P0CW71 290 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 CBR1P16152 277 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 ZNF14P17017 642 aaPredicted RBP13.5□□□□□ -0.25
CCL3-206ENST00000614051 AGAP20933 346 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 CRYGSP22914 178 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 ZNF83P51522 516 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 RIDAP52758 137 aaKnown RBP13.5□□□□□ -0.25
CCL3-206ENST00000614051 HGFACQ04756 655 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 MFGE8Q08431 387 aaPredicted RBP13.5□□□□□ -0.25
CCL3-206ENST00000614051 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 FAM220AQ7Z4H9 259 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 ALDH16A1Q8IZ83 802 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 RORBQ92753 470 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 PPP1R14AQ96A00 147 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 MUCL1Q96DR8 90 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 WFIKKN1Q96NZ8 548 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 OBP2BQ9NPH6 170 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 BRD7Q9NPI1 651 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 BABAM2Q9NXR7 383 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 NPAP1Q9NZP6 1156 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 SCOCQ9UIL1 159 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 N6AMT1Q9Y5N5 214 aa13.5□□□□□ -0.25
CCL3-206ENST00000614051 SPTBN1Q01082 2364 aaKnown RBP13.5□□□□□ -0.25
CCL3-206ENST00000614051 PNMA8CA0A1B0GUJ8 204 aa13.49□□□□□ -0.25
CCL3-206ENST00000614051 IQCMA0A1B0GVH7 501 aa13.49□□□□□ -0.25
CCL3-206ENST00000614051 CYSRT1A8MQ03 144 aa13.49□□□□□ -0.25
CCL3-206ENST00000614051 ZNF254O75437 659 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms