RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 ERFP50548 548 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.37■□□□□ 0.21
SGMS1-208ENST00000608287 DBPQ10586 325 aaPredicted RBP16.37■□□□□ 0.21
SGMS1-208ENST00000608287 TRIP10Q15642 601 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 SPATA46Q5T0L3 261 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 ZNF101Q8IZC7 436 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 OR6V1Q8N148 313 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 BPIFB2Q8N4F0 458 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 OR10G2Q8NGC3 310 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 OR8D4Q8NGM9 314 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 ABHD4Q8TB40 342 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 DGCR6LQ9BY27 220 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 DDX28Q9NUL7 540 aaKnown RBP16.37■□□□□ 0.21
SGMS1-208ENST00000608287 PLEK2Q9NYT0 353 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 GPR160Q9UJ42 338 aa16.37■□□□□ 0.21
SGMS1-208ENST00000608287 OR6C68A6NDL8 312 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 BHLHE40O14503 412 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 SOX14O95416 240 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 COX5BP10606 129 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 NAT2P11245 290 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 HOXB6P17509 224 aaKnown RBP16.36■□□□□ 0.21
SGMS1-208ENST00000608287 GSTM3P21266 225 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 RASSF2P50749 326 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 GK3PQ14409 553 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 KCNMB1Q16558 191 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 MEP1BQ16820 701 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 FAHD2BQ6P2I3 314 aaPredicted RBP16.36■□□□□ 0.21
SGMS1-208ENST00000608287 ARL9Q6T311 187 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 VASH1Q7L8A9 365 aaPredicted RBP16.36■□□□□ 0.21
SGMS1-208ENST00000608287 GIPC3Q8TF64 312 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 SNX33Q8WV41 574 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 FAHD2AQ96GK7 314 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 C4orf45Q96LM5 186 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 TSSK6Q9BXA6 273 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 RACGAP1Q9H0H5 632 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 ELOVL3Q9HB03 270 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 SLCO1C1Q9NYB5 712 aa16.36■□□□□ 0.21
SGMS1-208ENST00000608287 IGLV3-9A0A075B6K5 115 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 HLA-DQA2P01906 255 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 HKR1P10072 659 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 GAAP10253 952 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 GCH1P30793 250 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 GPR6P46095 362 aaPredicted RBP16.35■□□□□ 0.21
SGMS1-208ENST00000608287 ARHGDIAP52565 204 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 GLO1Q04760 184 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 ZNF718Q3SXZ3 478 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 RFPL4BQ6ZWI9 263 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 CYB561A3Q8NBI2 242 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 NPEPL1Q8NDH3 523 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 SLC25A40Q8TBP6 338 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 FEVQ99581 238 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 NIPSNAP1Q9BPW8 284 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 YY1AP1Q9H869 796 aa16.35■□□□□ 0.21
SGMS1-208ENST00000608287 ZMAT3Q9HA38 289 aaKnown RBP16.35■□□□□ 0.21
SGMS1-208ENST00000608287 TCRBV3S1A0A5B6 114 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 RER1O15258 196 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 FKBP6O75344 327 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 E2F6O75461 281 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 ATP5HO75947 161 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 ABHD16AO95870 558 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 NGFP01138 241 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 PPP1CBP62140 327 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 CBX1P83916 185 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 OCLNQ16625 522 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 MOGQ16653 247 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 CCDC92Q53HC0 331 aaPredicted RBP16.34■□□□□ 0.21
SGMS1-208ENST00000608287 ZBTB46Q86UZ6 589 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 C1orf174Q8IYL3 243 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 SLC26A10Q8NG04 563 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 OR2J1Q9GZK6 312 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 ARMC1Q9NVT9 282 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 LHFPL6Q9Y693 200 aa16.34■□□□□ 0.21
SGMS1-208ENST00000608287 A0A0G2JMP0 313 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 A0A0X1KG70 313 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 LYNX1G3V0Z9 82 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 IGHV3-13P01766 116 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 LYNX1P0DP58 116 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 ACHEP22303 614 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 FPR2P25090 351 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 MPV17P39210 176 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 TEKQ02763 1124 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 COX10Q12887 443 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 SLC36A3Q495N2 470 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 TMEM154Q6P9G4 183 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 CORO6Q6QEF8 472 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 RBMS3Q6XE24 437 aaKnown RBP16.33■□□□□ 0.2
SGMS1-208ENST00000608287 TMEM179BQ7Z7N9 219 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 LNX2Q8N448 690 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 GJC3Q8NFK1 279 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 OR2T33Q8NG76 320 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 OR4M2Q8NGB6 313 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 OR4Q3Q8NH05 313 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 OR1F12Q8NHA8 337 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 CLDND2Q8NHS1 167 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 NANPQ8TBE9 248 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 IPCEF1Q8WWN9 437 aaPredicted RBP16.33■□□□□ 0.2
SGMS1-208ENST00000608287 SLC7A6Q92536 515 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 MARS2Q96GW9 593 aaKnown RBP16.33■□□□□ 0.2
SGMS1-208ENST00000608287 CDADC1Q9BWV3 514 aa16.33■□□□□ 0.2
SGMS1-208ENST00000608287 LPAR2Q9HBW0 351 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms