RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 ICA1LQ8NDH6 482 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 SNX33Q8WV41 574 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 SLC7A6Q92536 515 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 YIPF5Q969M3 257 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 C1orf159Q96HA4 380 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 POFUT1Q9H488 388 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 CYSLTR2Q9NS75 346 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 PDP1Q9P0J1 537 aaPredicted RBP12.21□□□□□ -0.45
PRDM16-210ENST00000607632 POLR1DQ9Y2S0 133 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 STARD10Q9Y365 291 aa12.21□□□□□ -0.45
PRDM16-210ENST00000607632 SONP18583 2426 aaKnown RBP12.21□□□□□ -0.46
PRDM16-210ENST00000607632 ZSCAN5BA6NJL1 495 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 LYNX1G3V0Z9 82 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 MT-ND5P03915 603 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 CD55P08174 381 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 LYNX1P0DP58 116 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 PSKH1P11801 424 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 OSMP13725 252 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 ANXA8P13928 327 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 COL8A2P25067 703 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 OTX1P32242 354 aaPredicted RBP12.2□□□□□ -0.46
PRDM16-210ENST00000607632 PYCR1P32322 319 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 CRYBB2P43320 205 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 GZMKP49863 264 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 ZNF81P51508 661 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 TMEM33P57088 247 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 ECH1Q13011 328 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 GGTLC2Q14390 218 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 ALKBH6Q3KRA9 238 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 TMEM154Q6P9G4 183 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 SHQ1Q6PI26 577 aaKnown RBP12.2□□□□□ -0.46
PRDM16-210ENST00000607632 CORO6Q6QEF8 472 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 FBXW12Q6X9E4 464 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 ASRGL1Q7L266 308 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 HS3ST5Q8IZT8 346 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 OR10S1Q8NGN2 331 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 TEX47Q8TBZ9 253 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 GTF3AQ92664 365 aaKnown RBP12.2□□□□□ -0.46
PRDM16-210ENST00000607632 HAVCR1Q96D42 359 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 MAP6Q96JE9 813 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 C1QTNF5Q9BXJ0 243 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 DDX28Q9NUL7 540 aaKnown RBP12.2□□□□□ -0.46
PRDM16-210ENST00000607632 TMEM160Q9NX00 188 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 COMMD3-BMI1R4GMX3 469 aa12.2□□□□□ -0.46
PRDM16-210ENST00000607632 GNGT2O14610 69 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 DEAF1O75398 565 aaPredicted RBP12.19□□□□□ -0.46
PRDM16-210ENST00000607632 CRLF1O75462 422 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 IFNGP01579 166 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 IGHV1-46P01743 117 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 RAC2P15153 192 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 SPI1P17947 270 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 CENPAP49450 140 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 BLVRAP53004 296 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 CDK5Q00535 292 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 CDK5R2Q13319 367 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 ACSM5Q6NUN0 579 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 SLC27A4Q6P1M0 643 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 FAHD1Q6P587 224 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 LYPD4Q6UWN0 246 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 LINC00346Q8IVM7 164 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 PROKR2Q8NFJ6 384 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 OR9Q1Q8NGQ5 310 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 DNAJC9Q8WXX5 260 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 HPS1Q92902 700 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 PTP4A1Q93096 173 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 APOBEC3DQ96AK3 386 aaPredicted RBP12.19□□□□□ -0.46
PRDM16-210ENST00000607632 DIRC2Q96SL1 478 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 ATF6BQ99941 703 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 MARCH7Q9H992 704 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 ZNF275Q9NSD4 429 aaPredicted RBP12.19□□□□□ -0.46
PRDM16-210ENST00000607632 PURGQ9UJV8 347 aaKnown RBP12.19□□□□□ -0.46
PRDM16-210ENST00000607632 GRIP1Q9Y3R0 1128 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
PRDM16-210ENST00000607632 A0A1B0GWJ7 208 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 E2F6O75461 281 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 CLUP10909 449 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 ZNF3P17036 446 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 FMO3P31513 532 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 CHN2P52757 468 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 CCL8P80075 99 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 PPP2R2BQ00005 443 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 CCNIQ14094 377 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 CARTPTQ16568 116 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 ZMAT1Q5H9K5 638 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 CYB5R2Q6BCY4 276 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 PARP8Q8N3A8 854 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 OR2AJ1Q8NGZ0 328 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 MSI2Q96DH6 328 aaKnown RBP12.18□□□□□ -0.46
PRDM16-210ENST00000607632 HCAR1Q9BXC0 346 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 SLC25A19Q9HC21 320 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 ZDHHC8Q9ULC8 765 aa12.18□□□□□ -0.46
PRDM16-210ENST00000607632 PLSCR5A0PG75 271 aa12.17□□□□□ -0.46
PRDM16-210ENST00000607632 TVP23AA6NH52 213 aa12.17□□□□□ -0.46
PRDM16-210ENST00000607632 RIIAD1A6NNX1 92 aa12.17□□□□□ -0.46
PRDM16-210ENST00000607632 A8MV72 311 aaPredicted RBP12.17□□□□□ -0.46
PRDM16-210ENST00000607632 H3BN98 237 aa12.17□□□□□ -0.46
PRDM16-210ENST00000607632 SURF4O15260 269 aa12.17□□□□□ -0.46
PRDM16-210ENST00000607632 TIPRLO75663 272 aa12.17□□□□□ -0.46
PRDM16-210ENST00000607632 HLA-DQA2P01906 255 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms