RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 NDUFS8O00217 210 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TP53I11O14683 189 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PTGESO14684 152 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PHOX2AO14813 284 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HCRTR2O43614 444 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR1F1O43749 312 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PIP5K1CO60331 668 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SRPX2O60687 465 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BKO60814 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF821O75541 412 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 JTBO76095 146 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 FARS2O95363 451 aaKnown RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR2C1O95371 312 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ETHE1O95571 254 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 IGSF6O95976 241 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TK1P04183 234 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 LGALS2P05162 132 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 BCHEP06276 602 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BJP06899 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SNRNP70P08621 437 aaKnown RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 MMP10P09238 476 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SEC11BP0C7V7 166 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR5H8P0DN80 308 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 GZMBP10144 247 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PGAM2P15259 253 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CSF2RAP15509 400 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF19P17023 458 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF25P17030 456 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TBPP20226 339 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BOP23527 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CXCR1P25024 350 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TEAD1P28347 426 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TACR3P29371 465 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PPP2R1BP30154 601 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PYCR1P32322 319 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD80P33681 288 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BBP33778 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CD200P41217 278 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 RGRP47804 291 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ARRB1P49407 418 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TDGF1P3P51864 188 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 RND2P52198 227 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CLDN12P56749 244 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR12D2P58182 307 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BDP58876 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAS2R38P59533 333 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAS2R31P59538 309 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 STXBP1P61764 594 aaKnown RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST1H2BCP62807 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HTRA4P83105 476 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZXDBP98169 803 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ROM1Q03395 351 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TLE2Q04725 743 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PRDX4Q13162 271 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TNFAIP1Q13829 316 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNHIT3Q15649 155 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST2H2BEQ16778 126 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM176BQ3YBM2 270 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 KHDC3LQ587J8 217 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 AWAT1Q58HT5 328 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 C1orf194Q5T5A4 169 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF684Q5T5D7 378 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 FBXW9Q5XUX1 488 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 GGNBP1Q5YKI7 109 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SP5Q6BEB4 398 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 FAM166AQ6J272 317 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PCSK4Q6UW60 755 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CLEC9AQ6UXN8 241 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 STAC2Q6ZMT1 411 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 LANCL3Q6ZV70 420 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CHST9Q7L1S5 443 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 BIVMQ86UB2 503 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM173Q86WV6 379 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 GKN2Q86XP6 184 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 TRAPPC5Q8IUR0 188 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF595Q8IYB9 648 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 IZUMO1Q8IYV9 350 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 GABRG1Q8N1C3 465 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 KDM8Q8N371 416 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 NKAIN3Q8N8D7 197 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 ADPRHL1Q8NDY3 354 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 CCDC54Q8NEL0 328 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 LFNGQ8NES3 379 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 BBS1Q8NFJ9 593 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR8G5Q8NG78 346 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR52E1Q8NGJ3 308 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR51S1Q8NGJ8 323 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR9A2Q8NGT5 310 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR2L8Q8NGY9 312 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 PPTC7Q8NI37 304 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SCAMP5Q8TAC9 235 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SUN3Q8TAQ9 357 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 NUBPLQ8TB37 319 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 POC1BQ8TC44 478 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SFXN5Q8TD22 340 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 GPR148Q8TDV2 347 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 AUTS2Q8WXX7 1259 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 DNASE2BQ8WZ79 361 aa3.64□□□□□ -1.83
HMGB1P50-201ENST00000605814 SMPDL3BQ92485 455 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms