RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SEMA3BQ13214 749 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 MKXQ8IYA7 352 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM99Q8N816 258 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 NKX3-1Q99801 234 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 FREM3P0C091 2139 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 LTBP3Q9NS15 1303 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF264O43296 627 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 SELENOFO60613 162 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 PRKRAO75569 313 aaKnown RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 BLVRBP30043 206 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ASCL1P50553 236 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 P2RX1P51575 399 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 LTB4RQ15722 352 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 NCR3LG1Q68D85 454 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ADGRE4PQ86SQ3 457 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 OR2A14Q96R47 310 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 GMLQ99445 158 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 CD207Q9UJ71 328 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 KIR2DS5A0A0G2JLQ3 304 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 A0A0G2JNG1 304 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 KIR2DS3K7RE56 304 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ADAMTS4O75173 837 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 TSPAN12O95859 305 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ARG1P05089 322 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 KIR2DS5Q14953 304 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 OR2AK2Q8NG84 335 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 OR1J2Q8NGS2 313 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 LHFPL5Q8TAF8 219 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 WDR83Q9BRX9 315 aaKnown RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 SLC22A7Q9Y694 548 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 BLACEA4D250 179 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 GPR75O95800 540 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 HOXD9P28356 352 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 GALR1P47211 349 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 UBE2G2P60604 165 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 BAMBIQ13145 260 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 MIDNQ504T8 468 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM64Q6YI46 380 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 SYT9Q86SS6 491 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ZFPM2Q8WW38 1151 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 KLF16Q9BXK1 252 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ULBP2Q9BZM5 246 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 LANCL2Q9NS86 450 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 MUTYHQ9UIF7 546 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 STRAPQ9Y3F4 350 aaKnown RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 XRCC2O43543 280 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ENSAO43768 121 aaKnown RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 SLC35A2P78381 396 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 CDK5Q00535 292 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ST3GAL2Q16842 350 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 HENMT1Q5T8I9 393 aaKnown RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 VRK3Q8IV63 474 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 STT3BQ8TCJ2 826 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 TSLPQ969D9 159 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 FAM210BQ96KR6 192 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 GTF3C1Q12789 2109 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 IGKV6D-21A0A0A0MT36 114 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 PRAMEF4O60810 478 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 GLCEO94923 617 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 CPEP16870 476 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 PI3P19957 117 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 SLC14A2Q15849 920 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 MANEAQ5SRI9 462 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ABHD6Q9BV23 337 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 SLC6A11P48066 632 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF684Q5T5D7 378 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 OR4A47Q6IF82 309 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 PKD1L3Q7Z443 1732 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF573Q86YE8 665 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 BLNKQ8WV28 456 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 PISDQ9UG56 409 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 MRPS28Q9Y2Q9 187 aaKnown RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 NSG1A0A0A6YYJ2 146 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 BMPR1BO00238 502 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 DRD1P21728 446 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 NHLRC1Q6VVB1 395 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF600Q6ZNG1 722 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 OLIG3Q7RTU3 272 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 PDLIM7Q9NR12 457 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 SYT14P1Q58G82 188 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 NKAIN2Q5VXU1 208 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 BATF2Q8N1L9 274 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 NANOGP1Q8N7R0 232 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 FGF13Q92913 245 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 GPR87Q9BY21 358 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 MAGT1Q9H0U3 335 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 GEMIN2O14893 280 aaKnown RBP7.96□□□□□ -1.13
CSMD1-216ENST00000602557 ACAA2P42765 397 aaKnown RBP7.96□□□□□ -1.13
CSMD1-216ENST00000602557 HAAOP46952 286 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 SLC16A12Q6ZSM3 486 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 LINC00346Q8IVM7 164 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 PYCARD-AS1I3L0S3 204 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 HTR1FP30939 366 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 CLDN17P56750 224 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 TAAR9Q96RI9 348 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 TRAPPC2LQ9UL33 140 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 FANCMQ8IYD8 2048 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.13
CSMD1-216ENST00000602557 DPP4P27487 766 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms