RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ZNF446Q9NWS9 450 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 IL20RAQ9UHF4 553 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 AURKCQ9UQB9 309 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 AUP1Q9Y679 476 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 ANK2Q01484 3957 aa14.3□□□□□ -0.12
SCAF1-204ENST00000601038 TRBV4-1A0A0J9YWV2 114 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 A8MXK9 166 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 F5H0A9 414 aaPredicted RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 TMEM178BH3BS89 294 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 IFNL4K9M1U5 179 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 DBHP09172 617 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 ZNF12P17014 697 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 CRABP1P29762 137 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 MDH1P40925 334 aaKnown RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 MDH2P40926 338 aaKnown RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 ERFP50548 548 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 PSME3P61289 254 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 SEC61A1P61619 476 aaKnown RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 UBA52P62987 128 aaKnown RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 HLXQ14774 488 aaPredicted RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 SEC23BQ15437 767 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 GLYATQ6IB77 296 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 PGM2L1Q6PCE3 622 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 ATG16L2Q8NAA4 619 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 GJC3Q8NFK1 279 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 OR8G5Q8NG78 346 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 OR13G1Q8NGZ3 307 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 APOBEC3DQ96AK3 386 aaPredicted RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 DHRS1Q96LJ7 313 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 GCM1Q9NP62 436 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 DCAF13Q9NV06 445 aaKnown RBP14.29□□□□□ -0.12
SCAF1-204ENST00000601038 NUP50Q9UKX7 468 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 POLR1DQ9Y2S0 133 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 INSIG2Q9Y5U4 225 aa14.29□□□□□ -0.12
SCAF1-204ENST00000601038 UNC119BA6NIH7 251 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 CPT2P23786 658 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 MMP16P51512 607 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 HIST1H3AP68431 136 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 ESCO2Q56NI9 601 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 ARMCX4Q5H9R4 360 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 HIST2H3PS2Q5TEC6 136 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 SMARCD3Q6STE5 483 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 RBMS3Q6XE24 437 aaKnown RBP14.28□□□□□ -0.12
SCAF1-204ENST00000601038 HIST2H3AQ71DI3 136 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 OR5AS1Q8N127 324 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 MUC20Q8N307 709 aaPredicted RBP14.28□□□□□ -0.12
SCAF1-204ENST00000601038 SGMS2Q8NHU3 365 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 CMTM5Q96DZ9 223 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 ZNF582Q96NG8 517 aaPredicted RBP14.28□□□□□ -0.12
SCAF1-204ENST00000601038 COQ7Q99807 217 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 FUZQ9BT04 418 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 HDHD2Q9H0R4 259 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 PTTG3PQ9NZH4 202 aa14.28□□□□□ -0.12
SCAF1-204ENST00000601038 SAMD4AQ9UPU9 718 aaKnown RBP14.28□□□□□ -0.12
SCAF1-204ENST00000601038 DCTN6O00399 190 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 SPRY1O43609 319 aaPredicted RBP14.27□□□□□ -0.13
SCAF1-204ENST00000601038 WNT2P09544 360 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 EGR1P18146 543 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 CENPAP49450 140 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 SRP9P49458 86 aaKnown RBP14.27□□□□□ -0.13
SCAF1-204ENST00000601038 KRT72Q14CN4 511 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 HSP90B2PQ58FF3 399 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 AWAT1Q58HT5 328 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 OR2T2Q6IF00 324 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 DNM1P34Q6PK57 102 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 OR52J3Q8NH60 311 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 MEGF10Q96KG7 1140 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 TSSK2Q96PF2 358 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 GPA33Q99795 319 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 MRI1Q9BV20 369 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 SPAG4Q9NPE6 437 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 B9D1Q9UPM9 204 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 LRCH1Q9Y2L9 728 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 PPIAL4AQ9Y536 164 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 LHFPL6Q9Y693 200 aa14.27□□□□□ -0.13
SCAF1-204ENST00000601038 IGLV1-36A0A0B4J1U3 117 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 CEACAM18A8MTB9 384 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 GMNNO75496 209 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 DIRAS1O95057 198 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 GPANK1O95872 356 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 SMIM11AP58511 58 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 PAX8Q06710 450 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 COX10Q12887 443 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 MEP1BQ16820 701 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 RSPO1Q2MKA7 263 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-204ENST00000601038 RFX4Q33E94 735 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 KLF17Q5JT82 389 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-204ENST00000601038 COLCA1Q6ZS62 124 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 DOK3Q7L591 496 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 OR6V1Q8N148 313 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 FAM86B1Q8N7N1 296 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 SIGLECL1Q8N7X8 197 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 OR10AD1Q8NGE0 317 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 ERMAPQ96PL5 475 aaPredicted RBP14.26□□□□□ -0.13
SCAF1-204ENST00000601038 SLC30A2Q9BRI3 323 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 MYLK2Q9H1R3 596 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 GORASP2Q9H8Y8 452 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 TMEM165Q9HC07 324 aa14.26□□□□□ -0.13
SCAF1-204ENST00000601038 SRA1Q9HD15 236 aaKnown RBP14.26□□□□□ -0.13
SCAF1-204ENST00000601038 ZNF69Q9UC07 566 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms