RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 EGR1P18146 543 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 SDHAP31040 664 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 BAMBIQ13145 260 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 TMEM155Q4W5P6 130 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 GPR139Q6DWJ6 353 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 TSEN54Q7Z6J9 526 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 OR5L1Q8NGL2 311 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 POP5Q969H6 163 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 ZMYND19Q96E35 227 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 RPS6KA6Q9UK32 745 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 NUP50Q9UKX7 468 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 SIGLEC7Q9Y286 467 aa14.79□□□□□ -0.04
SHKBP1-223ENST00000600552 OR6C6A6NF89 314 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 TMEM178BH3BS89 294 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 CCDC22O60826 627 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 FSHBP01225 129 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 RAC2P15153 192 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 TUBG1P23258 451 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 MDH2P40926 338 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 CDKN2AP42771 156 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 MMP16P51512 607 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 PSME3P61289 254 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 KRT72Q14CN4 511 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 SEC23BQ15437 767 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 MOGAT3Q86VF5 341 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 RNF148Q8N7C7 305 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 DVL3Q92997 716 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 COG8Q96MW5 612 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 ZNF582Q96NG8 517 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 ERMAPQ96PL5 475 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 SIGLEC11Q96RL6 698 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 MS4A7Q9GZW8 240 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 GCM1Q9NP62 436 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 NRIP3Q9NQ35 241 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 TUBG2Q9NRH3 451 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 ADA2Q9NZK5 511 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 INSIG2Q9Y5U4 225 aa14.78□□□□□ -0.04
SHKBP1-223ENST00000600552 CEACAM18A8MTB9 384 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 F5H5P2 479 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 GMNNO75496 209 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 RPS2P15880 293 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 ZNF12P17014 697 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 RPS6KA3P51812 740 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 LSM6P62312 80 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 KLF17Q5JT82 389 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 FAM201AQ5SY85 155 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 GLYATQ6IB77 296 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 LEG1Q6P5S2 330 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 OR13G1Q8NGZ3 307 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 SGMS2Q8NHU3 365 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 MEGF10Q96KG7 1140 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 ANKRD19PQ9H560 264 aa14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 KRCC1Q9NPI7 259 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 VSX1Q9NZR4 365 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 SOX21Q9Y651 276 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-223ENST00000600552 PPIAL4EA0A075B759 164 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 PPIAL4CA0A0B4J2A2 164 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 DNAJC9-AS1A6NH13 148 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 PPIAL4DF5H284 164 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 HLA-DQA2P01906 255 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 HLA-DPB1P04440 258 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 PPIAL4FP0DN26 164 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 SELEP16581 610 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 RHCEP18577 417 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 CD80P33681 288 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 OMPP47874 163 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 SRP9P49458 86 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 RGS6P49758 472 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 SLC27A4Q6P1M0 643 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 DNM1P34Q6PK57 102 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 DPY19L2P2Q6ZN68 376 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 ADCK1Q86TW2 530 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 LINC00346Q8IVM7 164 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 MUC20Q8N307 709 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 FAM86B1Q8N7N1 296 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 FAM156AQ8NDB6 213 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 GJC3Q8NFK1 279 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 OR8G5Q8NG78 346 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 OR52E2Q8NGJ4 325 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 TAF15Q92804 592 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 APOBEC3DQ96AK3 386 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 GPA33Q99795 319 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 NDUFAF4Q9P032 175 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 LHFPL6Q9Y693 200 aa14.76□□□□□ -0.05
SHKBP1-223ENST00000600552 A0A1W2PRQ8 180 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 F5H5K5 113 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 DCTN6O00399 190 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 RENP00797 406 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 WNT2P09544 360 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 FXYD6P3P58550 94 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 GNB2P62879 340 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 SPIBQ01892 262 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 DGCR6Q14129 220 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 HSP90B2PQ58FF3 399 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 SMARCD3Q6STE5 483 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 DOK3Q7L591 496 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 C19orf18Q8NEA5 215 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 OR4K13Q8NH42 304 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 FANK1Q8TC84 345 aa14.75□□□□□ -0.05
SHKBP1-223ENST00000600552 ZNF48Q96MX3 618 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms