RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 CXXC5Q7LFL8 322 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 DCXRQ7Z4W1 244 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 C10orf67Q8IYJ2 551 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 OR6K6Q8NGW6 343 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 ABHD4Q8TB40 342 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 KLF14Q8TD94 323 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 IPCEF1Q8WWN9 437 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 GTF3AQ92664 365 aaKnown RBP16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 ZMYND19Q96E35 227 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 Q96MF0 132 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 ATF6BQ99941 703 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 OR2J1Q9GZK6 312 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 OR51V1Q9H2C8 321 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 STARD10Q9Y365 291 aa16.69■□□□□ 0.26
SHKBP1-221ENST00000599833 A0A096LNT2 108 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 TRIM64A6NGJ6 449 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 TRIM64BA6NI03 449 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 ZNF593O00488 134 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 F12P00748 615 aaPredicted RBP16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 LCKP06239 509 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 ACSM4P0C7M7 580 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 ZNF823P16415 610 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 GSTT1P30711 240 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 ALDH3B1P43353 468 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 MMP15P51511 669 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 EFNA4P52798 201 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 BLVRAP53004 296 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 PPP1CBP62140 327 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 SLC35D3Q5M8T2 416 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 NAA40Q86UY6 237 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 CBR4Q8N4T8 237 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 SYNPRQ8TBG9 265 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 DCLRE1CQ96SD1 692 aaKnown RBP16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 MBOAT4Q96T53 435 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 C1QTNF5Q9BXJ0 243 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 PMF1-BGLAPU3KQ54 211 aa16.68■□□□□ 0.26
SHKBP1-221ENST00000599833 C5orf63A6NC05 138 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 H3BSA7 217 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 DLGAP1O14490 977 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 SELENOFO60613 162 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 ABHD16AO95870 558 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 SPARCP09486 303 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 PAICSP22234 425 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 ALKBH6Q3KRA9 238 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 TMEM154Q6P9G4 183 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 DPY19L4Q7Z388 723 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 INTS14Q96SY0 518 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 PITX2Q99697 317 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 CDADC1Q9BWV3 514 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 EIF3KQ9UBQ5 218 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 DUSP13Q9UII6 198 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 KLHDC2Q9Y2U9 406 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 GRIP1Q9Y3R0 1128 aa16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 YLPM1P49750 1951 aaKnown RBP16.67■□□□□ 0.26
SHKBP1-221ENST00000599833 VSTM5A8MXK1 200 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 SSX4O60224 188 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 ADRA2AP08913 450 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 KLF3P57682 345 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 APOFQ13790 326 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 GGTLC2Q14390 218 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 CLEC12BQ2HXU8 276 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 ERI1Q8IV48 349 aaKnown RBP16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 C1orf174Q8IYL3 243 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 ZNF525Q8N782 197 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 TCEANCQ8N8B7 351 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 OR2AJ1Q8NGZ0 328 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 TMEM163Q8TC26 289 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 OTULINQ96BN8 352 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 SLAMF6Q96DU3 332 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 TEAD3Q99594 435 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 TPK1Q9H3S4 243 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 RIBC2Q9H4K1 309 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 ELOVL3Q9HB03 270 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 BARX1Q9HBU1 254 aaPredicted RBP16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 TAAR3PQ9P1P4 343 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 TLN2Q9Y4G6 2542 aa16.66■□□□□ 0.26
SHKBP1-221ENST00000599833 IGHV4-30-2A0A087WSY4 118 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 PRR32B1ATL7 298 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 J3QW42 95 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 M0R233 179 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 TLX2O43763 284 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 NAT2P11245 290 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 BMP4P12644 408 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 ECH1Q13011 328 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 PSG7Q13046 419 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 TNK1Q13470 666 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 KLHL12Q53G59 568 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 OR6N2Q8NGY6 317 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 OTOSQ8NHW6 89 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 RNF133Q8WVZ7 376 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 COX4I2Q96KJ9 171 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 ABHD6Q9BV23 337 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 ENOPH1Q9UHY7 261 aa16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 FBXO9Q9UK97 447 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 NSD1Q96L73 2696 aaPredicted RBP16.65■□□□□ 0.26
SHKBP1-221ENST00000599833 NCR1O76036 304 aa16.64■□□□□ 0.25
SHKBP1-221ENST00000599833 KITLGP21583 273 aa16.64■□□□□ 0.25
SHKBP1-221ENST00000599833 TUBG1P23258 451 aa16.64■□□□□ 0.25
SHKBP1-221ENST00000599833 RGS6P49758 472 aa16.64■□□□□ 0.25
SHKBP1-221ENST00000599833 ZNF718Q3SXZ3 478 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms