RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	PPIAL4E	A0A075B759	164 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	PPIAL4C	A0A0B4J2A2	164 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	DNAJC9-AS1	A6NH13	148 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223		F5H0A9	414 aa	Predicted RBP	12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	PPIAL4D	F5H284	164 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223		H3BNX3	289 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	IMPA2	O14732	288 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	FOXH1	O75593	365 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	SBK2	P0C263	348 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	PPIAL4F	P0DN26	164 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	RAP2A	P10114	183 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	CTLA4	P16410	223 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	FAS	P25445	335 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	LIPA	P38571	399 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	HTR5A	P47898	357 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	PCBD1	P61457	104 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	SLC3A1	Q07837	685 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	ZMAT1	Q5H9K5	638 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	UNQ6126/PRO20091	Q6UXV3	157 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	VASH1	Q7L8A9	365 aa	Predicted RBP	12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	ALDH16A1	Q8IZ83	802 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	ZNF283	Q8N7M2	679 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	OR2Z1	Q8NG97	314 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	SGMS2	Q8NHU3	365 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	ST7L	Q8TDW4	575 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	CANT1	Q8WVQ1	401 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	ITLN1	Q8WWA0	313 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	LZIC	Q8WZA0	190 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	TAF15	Q92804	592 aa	Known RBP eCLIP	12.35	□□□□□ -0.43	2e-8	■■□□□ 13.9
IRF3-223	ENST00000599223		Q96M85	177 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	RBP7	Q96R05	134 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223	MAGIX	Q9H6Y5	334 aa		12.35	□□□□□ -0.43
IRF3-223	ENST00000599223		A6NIZ1	184 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	C12orf71	A8MTZ7	269 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	EFCAB9	A8MZ26	197 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	ZNF682	O95780	498 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	SERPINA1	P01009	418 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	ZNF12	P17014	697 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	SLC9A3	P48764	834 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	MMP16	P51512	607 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	ARHGDIA	P52565	204 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	RAP1B	P61224	184 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	BTG1	P62324	171 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	RAP1A	P62834	184 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	SELENOW	P63302	87 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	PRKCD	Q05655	676 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	ZNF154	Q13106	437 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	TBPL2	Q6SJ96	375 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	FKBP9P1	Q75LS8	142 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	DOK3	Q7L591	496 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	FAM122B	Q7Z309	247 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	OAF	Q86UD1	273 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	ADGRG5	Q8IZF4	528 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	NPEPL1	Q8NDH3	523 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	FNDC8	Q8TC99	324 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	DIRC2	Q96SL1	478 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	ELOVL3	Q9HB03	270 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	PATZ1	Q9HBE1	687 aa	Known RBP	12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	DCAF13	Q9NV06	445 aa	Known RBP	12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	TBCCD1	Q9NVR7	557 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	NDRG4	Q9ULP0	352 aa	Known RBP	12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	SOX21	Q9Y651	276 aa	Predicted RBP	12.34	□□□□□ -0.43
IRF3-223	ENST00000599223	DOCK11	Q5JSL3	2073 aa		12.34	□□□□□ -0.43
IRF3-223	ENST00000599223		A0A087WUU8	490 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	TCRBV5S2	A0A599	114 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223		A8MXK9	166 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	TMPRSS2	O15393	492 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	SGCE	O43556	437 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	DBH	P09172	617 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	HKR1	P10072	659 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	COX5B	P10606	129 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	GSTM3	P21266	225 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	KITLG	P21583	273 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	SLC6A9	P48067	706 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	TRAM2	Q15035	370 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	TMEM155	Q4W5P6	130 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	ARMCX4	Q5H9R4	360 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	TSEN54	Q7Z6J9	526 aa	Known RBP	12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	SYT9	Q86SS6	491 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	C1orf174	Q8IYL3	243 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	SPIC	Q8N5J4	248 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	ACOT11	Q8WXI4	607 aa	Predicted RBP	12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	RASD2	Q96D21	266 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	CMBL	Q96DG6	245 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	PYURF	Q96I23	114 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	OR2V2	Q96R30	315 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	DDX28	Q9NUL7	540 aa	Known RBP	12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	STARD10	Q9Y365	291 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	INSIG2	Q9Y5U4	225 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223		V9GYQ6	96 aa		12.33	□□□□□ -0.44
IRF3-223	ENST00000599223	TEX13C	A0A0J9YWL9	993 aa		12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	OR6C6	A6NF89	314 aa		12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	CEACAM18	A8MTB9	384 aa		12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	GNGT2	O14610	69 aa		12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	CASQ2	O14958	399 aa	Predicted RBP	12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	TIPRL	O75663	272 aa		12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	IFNW1	P05000	195 aa		12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	CD14	P08571	375 aa		12.32	□□□□□ -0.44
IRF3-223	ENST00000599223	FPR2	P25090	351 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms