RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 ZNF841Q6ZN19 808 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 FAM122BQ7Z309 247 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 MOGAT3Q86VF5 341 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 TMEM86BQ8N661 226 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 PCYOX1LQ8NBM8 494 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 FAM156AQ8NDB6 213 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 OR8B3Q8NGG8 313 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 OR13C2Q8NGS9 318 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 OR13G1Q8NGZ3 307 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 PRRC1Q96M27 445 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 MAGEB18Q96M61 343 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 OR8B2Q96RD0 313 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 CCT8L2Q96SF2 557 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 PKP2Q99959 881 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 SLC30A2Q9BRI3 323 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 TNFRSF19Q9NS68 423 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 ATPIF1Q9UII2 106 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 ADAM18Q9Y3Q7 739 aa8.3□□□□□ -1.08
LIG1-209ENST00000596104 TEX13CA0A0J9YWL9 993 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 PRSS37A4D1T9 235 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 IQCF6A8MYZ5 107 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 F5H5P2 479 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 M0QZ24 198 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 PHYHO14832 338 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 TNFRSF13BO14836 293 aaPredicted RBP8.29□□□□□ -1.08
LIG1-209ENST00000596104 AHCYL1O43865 530 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 CRYBA1P05813 215 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 MELTFP08582 738 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 MMP9P14780 707 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 SELEP16581 610 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 PSMB10P40306 273 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 GATA4P43694 442 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 SRP9P49458 86 aaKnown RBP8.29□□□□□ -1.08
LIG1-209ENST00000596104 RGS6P49758 472 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 ANKDD1AQ495B1 522 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 CYBRD1Q53TN4 286 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 MESTQ5EB52 335 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 GPR157Q5UAW9 335 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 RUSC1-AS1Q66K80 236 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 ASPHD2Q6ICH7 369 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 NLRC3Q7RTR2 1065 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 OAFQ86UD1 273 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 NRMQ8IXM6 262 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 OFCC1Q8IZS5 231 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 OR8J3Q8NGG0 315 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 OR1F12Q8NHA8 337 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 RASD2Q96D21 266 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 FAM71F1Q96KD3 344 aaPredicted RBP8.29□□□□□ -1.08
LIG1-209ENST00000596104 Q96M85 177 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 RBM4BQ9BQ04 359 aaKnown RBP8.29□□□□□ -1.08
LIG1-209ENST00000596104 PTTG3PQ9NZH4 202 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 ASH2LQ9UBL3 628 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 CLN8Q9UBY8 286 aa8.29□□□□□ -1.08
LIG1-209ENST00000596104 CMYA5Q8N3K9 4069 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 LRRC30A6NM36 301 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 EFCAB9A8MZ26 197 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 CDC42EP2O14613 210 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 IMPA2O14732 288 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 FFAR1O14842 300 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 TIMM23O14925 209 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 RER1O15258 196 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 ENSAO43768 121 aaKnown RBP8.28□□□□□ -1.08
LIG1-209ENST00000596104 IFNA14P01570 189 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 SFTPBP07988 381 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 CD14P08571 375 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 KDELR2P33947 212 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 CFHR2P36980 270 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 SLC9A3P48764 834 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 PROK1P58294 105 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 RPL15P61313 204 aaKnown RBP8.28□□□□□ -1.08
LIG1-209ENST00000596104 LSM6P62312 80 aaKnown RBP8.28□□□□□ -1.08
LIG1-209ENST00000596104 PRKCDQ05655 676 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 MAB21L1Q13394 359 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 CYLC2Q14093 348 aaPredicted RBP8.28□□□□□ -1.08
LIG1-209ENST00000596104 CLEC12AQ5QGZ9 265 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 BEND6Q5SZJ8 279 aaPredicted RBP8.28□□□□□ -1.08
LIG1-209ENST00000596104 AGBL2Q5U5Z8 902 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 ERICH5Q6P6B1 374 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 ZNF620Q6ZNG0 422 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 DCDC5Q6ZRR9 648 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 COLCA1Q6ZS62 124 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 C1orf87Q8N0U7 546 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 LINC01006Q8NI28 216 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 Q8TCH9 128 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 SSMEM1Q8WWF3 244 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 APOBEC3DQ96AK3 386 aaPredicted RBP8.28□□□□□ -1.08
LIG1-209ENST00000596104 ZNF583Q96ND8 569 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 ZNF582Q96NG8 517 aaPredicted RBP8.28□□□□□ -1.08
LIG1-209ENST00000596104 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 SH3GL1Q99961 368 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 ECSITQ9BQ95 431 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 RHCGQ9UBD6 479 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 GRHPRQ9UBQ7 328 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
LIG1-209ENST00000596104 A0A087WUU8 490 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 CENPVL3A0A0U1RRI6 287 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 J3KTA2 159 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 P2RY10O00398 339 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 GPR137BO60478 399 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms