RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ACCSQ96QU6 501 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 KLF6Q99612 283 aaPredicted RBP2.95□□□□□ -1.94
VMP1-212ENST00000591782 LPAR4Q99677 370 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 DOK1Q99704 481 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 NPAS2Q99743 824 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 NKX3-1Q99801 234 aaPredicted RBP2.95□□□□□ -1.94
VMP1-212ENST00000591782 HOPXQ9BPY8 73 aaPredicted RBP2.95□□□□□ -1.94
VMP1-212ENST00000591782 NICN1Q9BSH3 213 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 SYT11Q9BT88 431 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 NDUFAF3Q9BU61 184 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 MCRIP2Q9BUT9 160 aaKnown RBP2.95□□□□□ -1.94
VMP1-212ENST00000591782 TMEM109Q9BVC6 243 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 WDR54Q9H977 334 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 MYOZ2Q9NPC6 264 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 SPHK2Q9NRA0 654 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 GPR173Q9NS66 373 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 RASL12Q9NYN1 266 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 AHSPQ9NZD4 102 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 PITPNC1Q9UKF7 332 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 ZNF490Q9ULM2 529 aaPredicted RBP2.95□□□□□ -1.94
VMP1-212ENST00000591782 ING4Q9UNL4 249 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 FARSAQ9Y285 508 aaKnown RBP2.95□□□□□ -1.94
VMP1-212ENST00000591782 OR10H1Q9Y4A9 318 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 PEX16Q9Y5Y5 336 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 KIAA1551Q9HCM1 1747 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 CNTNAP1P78357 1384 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 MED14O60244 1454 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 MYOM2P54296 1465 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 NEO1Q92859 1461 aa2.95□□□□□ -1.94
VMP1-212ENST00000591782 KDM5AP29375 1690 aaKnown RBP2.95□□□□□ -1.94
VMP1-212ENST00000591782 NHSL1Q5SYE7 1610 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 RNF17Q9BXT8 1623 aaKnown RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 MYO5CQ9NQX4 1742 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 MEX3AA1L020 520 aaKnown RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 MBLAC1A4D2B0 266 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 PSMB11A5LHX3 300 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 ARL5CA6NH57 179 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 CYSRT1A8MQ03 144 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 H3BSA7 217 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 TEX46H3BTG2 121 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 FAAHO00519 579 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 UBDO15205 165 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 CHADO15335 359 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 MSH4O15457 936 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 CYB5BO43169 146 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 TGOLN2O43493 480 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 SRPX2O60687 465 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 CSO75390 466 aaKnown RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 SAP30O75446 220 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 GLSO94925 669 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 UTS2O95399 124 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 CYB5R3P00387 301 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 CD2P06729 351 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 C8GP07360 202 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 ZSCAN5DPP0CG00 497 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 FOLR2P14207 255 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 KCNE1P15382 129 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 ZNF30P17039 623 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 RPL35AP18077 110 aaKnown RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 SERPINA2P20848 420 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 FGF7P21781 194 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 KDELR2P33947 212 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 SHMT2P34897 504 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 SSTR5P35346 364 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 NUMBP49757 651 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 XGP55808 180 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 KRTAP10-7P60409 375 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 SLC7A9P82251 487 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 MRPS11P82912 194 aaKnown RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 GTF2BQ00403 316 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 IL5RAQ01344 420 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 SIGLEC14Q08ET2 396 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 INCA1Q0VD86 236 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 PDE7AQ13946 482 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 SERTAD2Q14140 314 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 OPCMLQ14982 345 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 TMEM132DQ14C87 1099 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 ABRAXAS2Q15018 415 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 MICAQ29983 383 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 POM121L1PQ3SYA9 428 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 ACSM3Q53FZ2 586 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 TPRG1LQ5T0D9 272 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 SAMD13Q5VXD3 122 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 TMEM225Q6GV28 225 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 H3F3CQ6NXT2 135 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 RNASEKQ6P5S7 137 aaKnown RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 TMEM220Q6QAJ8 160 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 WDR74Q6RFH5 385 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 SLC16A13Q7RTY0 426 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 ABI3BPQ7Z7G0 1075 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 RANBP3LQ86VV4 465 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 LRRC28Q86X40 367 aaPredicted RBP2.94□□□□□ -1.94
VMP1-212ENST00000591782 BOD1L2Q8IYS8 172 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 FAM71AQ8IYT1 594 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 SVBPQ8N300 66 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 RNF148Q8N7C7 305 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 CLDN22Q8N7P3 220 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 ZNF485Q8NCK3 441 aa2.94□□□□□ -1.94
VMP1-212ENST00000591782 OR4E2Q8NGC2 313 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms