RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 OR5D14Q8NGL3 314 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 TNFAIP8L1Q8WVP5 186 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 NAT6Q93015 286 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 KLHDC3Q9BQ90 382 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 CHIAQ9BZP6 476 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 ALX4Q9H161 411 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-206ENST00000589117 PTGES2Q9H7Z7 377 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 CENPMQ9NSP4 180 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 VDAC3Q9Y277 283 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 BRWD1Q9NSI6 2320 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 IGHV3-20A0A0C4DH32 117 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 TRBV11-1A0A0K0K1C0 115 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 A0A1W2PPC1 479 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 A0A1W2PQ72 361 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 H0YC42 278 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 H3BSH0 61 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 LCE2BO14633 110 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 SIGLEC6O43699 453 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 TLX3O43711 291 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-206ENST00000589117 TOXO94900 526 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 OR2A4O95047 310 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 EIF1P41567 113 aaKnown RBP6.61□□□□□ -1.35
ZNF540-206ENST00000589117 DMWDQ09019 674 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 ETFDHQ16134 617 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 LGALSLQ3ZCW2 172 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-206ENST00000589117 C3orf33Q6P1S2 294 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 C11orf88Q6PI97 169 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 COX15Q7KZN9 410 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 KANSL1Q7Z3B3 1105 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 PPP1R3BQ86XI6 285 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 UEVLDQ8IX04 471 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 UXS1Q8NBZ7 420 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 NFAM1Q8NET5 270 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-206ENST00000589117 OR11H4Q8NGC9 324 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 OR2AJ1Q8NGZ0 328 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 SLC25A43Q8WUT9 341 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-206ENST00000589117 CLDN23Q96B33 292 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 FOXN4Q96NZ1 517 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 OR2A7Q96R45 310 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 CRB3Q9BUF7 120 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 C1orf198Q9H425 327 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 EXO5Q9H790 373 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 TMEM138Q9NPI0 162 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 FANCFQ9NPI8 374 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 PRMT8Q9NR22 394 aaPredicted RBP6.61□□□□□ -1.35
ZNF540-206ENST00000589117 MED11Q9P086 117 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 MYOTQ9UBF9 498 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 RAB22AQ9UL26 194 aa6.61□□□□□ -1.35
ZNF540-206ENST00000589117 A0A087WV48 116 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 LOC107986453A0A1B0GWG9 222 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 LINC00862A6NCI5 91 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TUBAL3A6NHL2 446 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 LIPT2A6NK58 231 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 PRR33A8MZF0 331 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 L7N2F9 121 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TP53I11O14683 189 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 RAB3DO95716 219 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 IGHG1P01857 330 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 GIMD1P0DJR0 217 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TMIGD3P0DMS9 266 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 GABRA1P14867 456 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 IGFBP3P17936 291 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ANXA7P20073 488 aaKnown RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 CSRP1P21291 193 aaKnown RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 BCKDHBP21953 392 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 PTGS2P35354 604 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 EFNA3P52797 238 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 CLRN1P58418 232 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 RPS15P62841 145 aaKnown RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 MEF2DQ14814 521 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 MPPED2Q15777 294 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 GRK1Q15835 563 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SLC25A53Q5H9E4 307 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 CLVS2Q5SYC1 327 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 FAM166AQ6J272 317 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 Q6ZTK2 550 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 CHMP1BQ7LBR1 199 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 KDM8Q8N371 416 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 DTWD2Q8NBA8 298 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TMEM229BQ8NBD8 167 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ADPRHL1Q8NDY3 354 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 OR4C16Q8NGL9 310 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 GPX8Q8TED1 209 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 RNF133Q8WVZ7 376 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TAAR9Q96RI9 348 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SEC22CQ9BRL7 303 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 UQCC2Q9BRT2 126 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 DPCDQ9BVM2 203 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 DEFB126Q9BYW3 111 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SMOC1Q9H4F8 434 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 MOB1AQ9H8S9 216 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SLC22A11Q9NSA0 550 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 NXT1Q9UKK6 140 aaKnown RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 POLR1DQ9Y2S0 133 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 PCDHGA5Q9Y5G8 931 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 MPDZO75970 2070 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 COL5A1P20908 1838 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 IGLV3-32A0A0A0MS00 114 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TMEM272A0A1B0GTI8 110 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 A0A1W2PNV4 684 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms