RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 SIAH2O43255 324 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 CCDC159P0C7I6 412 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 PIPP12273 146 aaPredicted RBP11.8□□□□□ -0.52
VMP1-203ENST00000586245 DCKP27707 260 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 CALCRP30988 508 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 TPTEP56180 551 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 EGR3Q06889 387 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 RBM48Q5RL73 367 aaKnown RBP11.8□□□□□ -0.52
VMP1-203ENST00000586245 ADAM5Q6NVV9 412 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 DEGS2Q6QHC5 323 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 LRRN1Q6UXK5 716 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 UNQ6126/PRO20091Q6UXV3 157 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 STX19Q8N4C7 294 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 SNX33Q8WV41 574 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 IPCEF1Q8WWN9 437 aaPredicted RBP11.8□□□□□ -0.52
VMP1-203ENST00000586245 SLC7A6Q92536 515 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 TMEM80Q96HE8 168 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 KCNJ15Q99712 375 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 MROQ9BYG7 248 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 NIPAL2Q9H841 368 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 FGF20Q9NP95 211 aaPredicted RBP11.8□□□□□ -0.52
VMP1-203ENST00000586245 CHCHD3Q9NX63 227 aaKnown RBP11.8□□□□□ -0.52
VMP1-203ENST00000586245 PSORS1C1Q9UIG5 152 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 POU2F3Q9UKI9 436 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 GRIP1Q9Y3R0 1128 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 LRRC42Q9Y546 428 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 ATP23Q9Y6H3 246 aa11.8□□□□□ -0.52
VMP1-203ENST00000586245 SPTAN1Q13813 2472 aaKnown RBP11.8□□□□□ -0.52
VMP1-203ENST00000586245 USP9YO00507 2555 aaPredicted RBP11.79□□□□□ -0.52
VMP1-203ENST00000586245 ICE1Q9Y2F5 2266 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 PTGES3LE9PB15 166 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ATP6V1G2-DDX39BF2Z307 99 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 J3QRE1 110 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 PSMD9O00233 223 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ZNF254O75437 659 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ABHD16AO95870 558 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 IGHA1P01876 353 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 APOC1P02654 83 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 KRT8P05787 483 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 DBHP09172 617 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ZNF35P13682 527 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 OPRL1P41146 370 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 RGS6P49758 472 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 PRKXP51817 358 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 RIDAP52758 137 aaKnown RBP11.79□□□□□ -0.52
VMP1-203ENST00000586245 ROM1Q03395 351 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 SPOCK1Q08629 439 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ZNF704Q6ZNC4 412 aaPredicted RBP11.79□□□□□ -0.52
VMP1-203ENST00000586245 AHSA2Q719I0 299 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ZNF679Q8IYX0 411 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 RFLNBQ8N5W9 214 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ZNF283Q8N7M2 679 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 MYDGFQ969H8 173 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 C4orf45Q96LM5 186 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 OR8B4Q96RC9 309 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 ELOVL3Q9HB03 270 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 SLCO1C1Q9NYB5 712 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 MYRFQ9Y2G1 1151 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 EXOSC1Q9Y3B2 195 aaKnown RBP11.79□□□□□ -0.52
VMP1-203ENST00000586245 LRP12Q9Y561 859 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 DOPEY2Q9Y3R5 2298 aa11.79□□□□□ -0.52
VMP1-203ENST00000586245 METTL15A6NJ78 407 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 M0R135 149 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 MYL12AP19105 171 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 LOXP28300 417 aaPredicted RBP11.78□□□□□ -0.52
VMP1-203ENST00000586245 PCSK6P29122 969 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 RAD52P43351 418 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 SLC6A9P48067 706 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 ACTA2P62736 377 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 ACTG2P63267 376 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 ZNF85Q03923 595 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 ST3GAL4Q11206 333 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 GALEQ14376 348 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 KRTAP27-1Q3LI81 207 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 DRAM2Q6UX65 266 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 PLEKHG7Q6ZR37 379 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 SSX6Q7RTT6 188 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 FAM220AQ7Z4H9 259 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 LHFPL3Q86UP9 236 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 PAQR4Q8N4S7 273 aaPredicted RBP11.78□□□□□ -0.52
VMP1-203ENST00000586245 KBTBD8Q8NFY9 601 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 ZNF799Q96GE5 643 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 RHNO1Q9BSD3 238 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 TMEM204Q9BSN7 226 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 ALG8Q9BVK2 526 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 YTHDF1Q9BYJ9 559 aaKnown RBP11.78□□□□□ -0.52
VMP1-203ENST00000586245 BCL2L14Q9BZR8 327 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 SP140LQ9H930 580 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 UBAP1Q9NZ09 502 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
VMP1-203ENST00000586245 PCDHGB5Q9Y5G0 923 aa11.78□□□□□ -0.52
VMP1-203ENST00000586245 VSTM5A8MXK1 200 aa11.77□□□□□ -0.53
VMP1-203ENST00000586245 PRR32B1ATL7 298 aa11.77□□□□□ -0.53
VMP1-203ENST00000586245 SHISA9B4DS77 424 aa11.77□□□□□ -0.53
VMP1-203ENST00000586245 CTAG2O75638 210 aa11.77□□□□□ -0.53
VMP1-203ENST00000586245 SULT1C4O75897 302 aa11.77□□□□□ -0.53
VMP1-203ENST00000586245 PLAUP00749 431 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms