RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 TRAPPC2LH3BP13 241 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 TMEM178BH3BS89 294 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 SOCS2O14508 198 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 CCDC22O60826 627 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 EGR1P18146 543 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 CRABP1P29762 137 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 SRP9P49458 86 aaKnown RBP13.77□□□□□ -0.21
LSM12-202ENST00000585388 RPS6KA3P51812 740 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 SEC61A1P61619 476 aaKnown RBP13.77□□□□□ -0.21
LSM12-202ENST00000585388 HNRNPA0Q13151 305 aaKnown RBP13.77□□□□□ -0.21
LSM12-202ENST00000585388 KCNMB1Q16558 191 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 TUSC1Q2TAM9 212 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 CCDC92Q53HC0 331 aaPredicted RBP13.77□□□□□ -0.21
LSM12-202ENST00000585388 C8orf82Q6P1X6 216 aaPredicted RBP13.77□□□□□ -0.21
LSM12-202ENST00000585388 HACD2Q6Y1H2 254 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 OR5AS1Q8N127 324 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 ATG16L2Q8NAA4 619 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 OR8G5Q8NG78 346 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 APOBEC3DQ96AK3 386 aaPredicted RBP13.77□□□□□ -0.21
LSM12-202ENST00000585388 NUAK2Q9H093 628 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 CCDC134Q9H6E4 229 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 EFCAB1Q9HAE3 211 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 GCM1Q9NP62 436 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 PTTG3PQ9NZH4 202 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 IL20RAQ9UHF4 553 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 AURKCQ9UQB9 309 aa13.77□□□□□ -0.21
LSM12-202ENST00000585388 DNAJC9-AS1A6NH13 148 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 CEACAM18A8MTB9 384 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 RER1O15258 196 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 PTP4A3O75365 173 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 HKR1P10072 659 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 RHCEP18577 417 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 PRTN3P24158 256 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 ERFP50548 548 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 NUDT2P50583 147 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 DPY19L2P2Q6ZN68 376 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 TSEN54Q7Z6J9 526 aaKnown RBP13.76□□□□□ -0.21
LSM12-202ENST00000585388 GJC3Q8NFK1 279 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 OR10AD1Q8NGE0 317 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 OR13G1Q8NGZ3 307 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 MEGF10Q96KG7 1140 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 ZNF582Q96NG8 517 aaPredicted RBP13.76□□□□□ -0.21
LSM12-202ENST00000585388 COQ7Q99807 217 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 SSBP3Q9BWW4 388 aaPredicted RBP13.76□□□□□ -0.21
LSM12-202ENST00000585388 ZNF69Q9UC07 566 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 IER3IP1Q9Y5U9 82 aa13.76□□□□□ -0.21
LSM12-202ENST00000585388 UNC119BA6NIH7 251 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 TXNDC12O95881 172 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 DBHP09172 617 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 RPS2P15880 293 aaKnown RBP13.75□□□□□ -0.21
LSM12-202ENST00000585388 NCK1P16333 377 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 OMPP47874 163 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 HIST1H3AP68431 136 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 HLXQ14774 488 aaPredicted RBP13.75□□□□□ -0.21
LSM12-202ENST00000585388 KLF17Q5JT82 389 aaPredicted RBP13.75□□□□□ -0.21
LSM12-202ENST00000585388 HIST2H3PS2Q5TEC6 136 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 OTPQ5XKR4 325 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 OR2T2Q6IF00 324 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 SMARCD3Q6STE5 483 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 BTNL3Q6UXE8 466 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 PTCHD4Q6ZW05 846 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 HIST2H3AQ71DI3 136 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 C1orf87Q8N0U7 546 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 ZNF747Q9BV97 191 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 NDUFAF4Q9P032 175 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 ABCD2Q9UBJ2 740 aa13.75□□□□□ -0.21
LSM12-202ENST00000585388 SAMD4AQ9UPU9 718 aaKnown RBP13.75□□□□□ -0.21
LSM12-202ENST00000585388 TRBV4-1A0A0J9YWV2 114 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 LRRC30A6NM36 301 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 IQCF6A8MYZ5 107 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 GMNNO75496 209 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 PPIAL4GP0DN37 164 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 SELEP16581 610 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 RBMXP38159 391 aaKnown RBP13.74□□□□□ -0.21
LSM12-202ENST00000585388 CENPAP49450 140 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 FXYD6P3P58550 94 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 GNB2P62879 340 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 BAMBIQ13145 260 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 KRT72Q14CN4 511 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 ZNF181Q2M3W8 571 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 SHISA2Q6UWI4 295 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 JAZF1Q86VZ6 243 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 FANK1Q8TC84 345 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 PLEKHA8Q96JA3 519 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 SLC30A2Q9BRI3 323 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 HCAR1Q9BXC0 346 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 MS4A7Q9GZW8 240 aaPredicted RBP13.74□□□□□ -0.21
LSM12-202ENST00000585388 MIOXQ9UGB7 285 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 PCDHGB1Q9Y5G3 927 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 LHFPL6Q9Y693 200 aa13.74□□□□□ -0.21
LSM12-202ENST00000585388 IMPA2O14732 288 aa13.73□□□□□ -0.21
LSM12-202ENST00000585388 FSTL3O95633 263 aa13.73□□□□□ -0.21
LSM12-202ENST00000585388 PPP1R3DO95685 299 aa13.73□□□□□ -0.21
LSM12-202ENST00000585388 RENP00797 406 aa13.73□□□□□ -0.21
LSM12-202ENST00000585388 WNT2P09544 360 aa13.73□□□□□ -0.21
LSM12-202ENST00000585388 CDKN2AP42771 156 aaKnown RBP13.73□□□□□ -0.21
LSM12-202ENST00000585388 MTNR1AP48039 350 aa13.73□□□□□ -0.21
LSM12-202ENST00000585388 PAX8Q06710 450 aa13.73□□□□□ -0.21
LSM12-202ENST00000585388 COX10Q12887 443 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms