RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CDC42EP2O14613 210 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 TMPRSS2O15393 492 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 PTP4A3O75365 173 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 KHDRBS3O75525 346 aaKnown RBP12.61□□□□□ -0.39
VAPA-209ENST00000585042 SDHAP31040 664 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 YAP1P46937 504 aaKnown RBP12.61□□□□□ -0.39
VAPA-209ENST00000585042 MTNR1AP48039 350 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 IL13RA1P78552 427 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 MXRA7P84157 204 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 ZNF181Q2M3W8 571 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 IFI44LQ53G44 452 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 MESTQ5EB52 335 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 PGM2L1Q6PCE3 622 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 LRRN1Q6UXK5 716 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 C9orf139Q6ZV77 190 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 CBLL1Q75N03 491 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 ZNF771Q7L3S4 317 aaPredicted RBP12.61□□□□□ -0.39
VAPA-209ENST00000585042 VTCN1Q7Z7D3 282 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 CYP4Z1Q86W10 505 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 OR8G5Q8NG78 346 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 OR1F12Q8NHA8 337 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 SLC25A28Q96A46 364 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 ZNF570Q96NI8 536 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 OR2V2Q96R30 315 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 POFUT1Q9H488 388 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 NRIP3Q9NQ35 241 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 FAM53CQ9NYF3 392 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 ADA2Q9NZK5 511 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 VSX1Q9NZR4 365 aaPredicted RBP12.61□□□□□ -0.39
VAPA-209ENST00000585042 RHCGQ9UBD6 479 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 MIOXQ9UGB7 285 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 OR5V1Q9UGF6 321 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 ADAM18Q9Y3Q7 739 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 PCDHGB1Q9Y5G3 927 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 MEGF8Q7Z7M0 2845 aa12.61□□□□□ -0.39
VAPA-209ENST00000585042 H7C1C5 153 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 J3KTA2 159 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 SLC16A7O60669 478 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 NDUFB2O95178 105 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 RNASE1P07998 156 aaKnown RBP12.6□□□□□ -0.39
VAPA-209ENST00000585042 CTLA4P16410 223 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 ZNF26P17031 533 aaPredicted RBP12.6□□□□□ -0.39
VAPA-209ENST00000585042 FUT4P22083 530 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 SRP9P49458 86 aaKnown RBP12.6□□□□□ -0.39
VAPA-209ENST00000585042 LCN6P62502 163 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 PAX2Q02962 417 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 BAMBIQ13145 260 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 KRT72Q14CN4 511 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 C8orf82Q6P1X6 216 aaPredicted RBP12.6□□□□□ -0.39
VAPA-209ENST00000585042 TBPL2Q6SJ96 375 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 C16orf89Q6UX73 402 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 FKBP9P1Q75LS8 142 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 ADCK1Q86TW2 530 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 ATG16L2Q8NAA4 619 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 APOBEC3DQ96AK3 386 aaPredicted RBP12.6□□□□□ -0.39
VAPA-209ENST00000585042 PLEKHA8Q96JA3 519 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 GPX7Q96SL4 187 aaPredicted RBP12.6□□□□□ -0.39
VAPA-209ENST00000585042 MS4A7Q9GZW8 240 aaPredicted RBP12.6□□□□□ -0.39
VAPA-209ENST00000585042 ASH2LQ9UBL3 628 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 SIGLEC7Q9Y286 467 aa12.6□□□□□ -0.39
VAPA-209ENST00000585042 A0A1B0GWJ7 208 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 A0A1W2PRQ8 180 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 DNAJC9-AS1A6NH13 148 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 CEACAM18A8MTB9 384 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 CXCR6O00574 342 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 NME4O00746 187 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 ZNF682O95780 498 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 TXNDC12O95881 172 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 CD80P33681 288 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 GPR4P46093 362 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 GSK3BP49841 420 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 BPIFB3P59826 476 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 SEC61A1P61619 476 aaKnown RBP12.59□□□□□ -0.39
VAPA-209ENST00000585042 HIST1H3AP68431 136 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 DGCR6Q14129 220 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 CCDC92Q53HC0 331 aaPredicted RBP12.59□□□□□ -0.39
VAPA-209ENST00000585042 HIST2H3PS2Q5TEC6 136 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 BTNL3Q6UXE8 466 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 HIST2H3AQ71DI3 136 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 C1orf87Q8N0U7 546 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 GJC3Q8NFK1 279 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 OR52E2Q8NGJ4 325 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 SLC7A13Q8TCU3 470 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 UPRTQ96BW1 309 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 ZNF582Q96NG8 517 aaPredicted RBP12.59□□□□□ -0.39
VAPA-209ENST00000585042 COQ7Q99807 217 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
VAPA-209ENST00000585042 HDHD2Q9H0R4 259 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 TMEM165Q9HC07 324 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 ABCD2Q9UBJ2 740 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 COA3Q9Y2R0 106 aaPredicted RBP12.59□□□□□ -0.39
VAPA-209ENST00000585042 ENPP4Q9Y6X5 453 aa12.59□□□□□ -0.39
VAPA-209ENST00000585042 LRRC30A6NM36 301 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 SELEP16581 610 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 CRABP1P29762 137 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 MMP16P51512 607 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 KRR1Q13601 381 aaKnown RBP12.58□□□□□ -0.4
VAPA-209ENST00000585042 SAMD4BQ5PRF9 694 aaKnown RBP12.58□□□□□ -0.4
VAPA-209ENST00000585042 DPY19L2P2Q6ZN68 376 aa12.58□□□□□ -0.4
VAPA-209ENST00000585042 COLCA1Q6ZS62 124 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms