RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MRPL48Q96GC5 212 aaKnown RBP12□□□□□ -0.49
TRAF4-215ENST00000584944 C4orf45Q96LM5 186 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 COG8Q96MW5 612 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 DCLRE1CQ96SD1 692 aaKnown RBP12□□□□□ -0.49
TRAF4-215ENST00000584944 COQ7Q99807 217 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 TMEM204Q9BSN7 226 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 TMUB1Q9BVT8 246 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 CXXC4Q9H2H0 198 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 SP140LQ9H930 580 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 CA10Q9NS85 328 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 GPR160Q9UJ42 338 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 CMAHPQ9Y471 501 aa12□□□□□ -0.49
TRAF4-215ENST00000584944 FAM221AA4D161 298 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF670-ZNF695F2Z2N8 137 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 H0YJX3 145 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 PHYHO14832 338 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 ENTPD6O75354 484 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF35P13682 527 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 SLC2A5P22732 501 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 PCSK6P29122 969 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 GCH1P30793 250 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 CALCRP30988 508 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 APOBEC3AP31941 199 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-215ENST00000584944 SERPINF1P36955 418 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 VHLP40337 213 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 MTNR1AP48039 350 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 SNRPD2P62316 118 aaKnown RBP11.99□□□□□ -0.49
TRAF4-215ENST00000584944 GRB2P62993 217 aaKnown RBP11.99□□□□□ -0.49
TRAF4-215ENST00000584944 OCLNQ16625 522 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 CCDC92Q53HC0 331 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-215ENST00000584944 LINC01590Q5TEZ4 76 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 AADACL4Q5VUY2 407 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 RGS7BPQ6MZT1 257 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-215ENST00000584944 IZUMO2Q6UXV1 221 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 KRT77Q7Z794 578 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 MYPOPQ86VE0 399 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF611Q8N823 705 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 NUP37Q8NFH4 326 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 OR10H4Q8NGA5 316 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 OTOSQ8NHW6 89 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 TMEM171Q8WVE6 324 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 NINJ1Q92982 152 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 PIGTQ969N2 578 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 POM121L2Q96KW2 1035 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 MNTQ99583 582 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 FOXC2Q99958 501 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 MROQ9BYG7 248 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 Q9H521 79 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 CXorf56Q9H5V9 222 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 IKZF2Q9UKS7 526 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 PCDHGB1Q9Y5G3 927 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 N6AMT1Q9Y5N5 214 aa11.99□□□□□ -0.49
TRAF4-215ENST00000584944 NIPBLQ6KC79 2804 aaeCLIP11.99□□□□□ -0.492e-8■■■□□ 17.1
TRAF4-215ENST00000584944 VPS13CQ709C8 3753 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 A0A1W2PPW3 197 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 SYNGR3O43761 229 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 MT-ND5P03915 603 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 RAF1P04049 648 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 ERCC1P07992 297 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-215ENST00000584944 OR4A8P0C604 315 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 CD99P14209 185 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 AQP4P55087 323 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 UCP2P55851 309 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 ACTC1P68032 377 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 ACTA1P68133 377 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 MALLQ13021 153 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 SNCBQ16143 134 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 MOGQ16653 247 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 SLC25A30Q5SVS4 291 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 SLC35F2Q8IXU6 374 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 TIGD4Q8IY51 512 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 ENTHD1Q8IYW4 607 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 MUC15Q8N387 334 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 ZNF283Q8N7M2 679 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 OR1J1Q8NGS3 322 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 NRG4Q8WWG1 115 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 NEUROG1Q92886 237 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 UBE2FQ969M7 185 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 APOBEC3DQ96AK3 386 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-215ENST00000584944 RNFT2Q96EX2 444 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 ABHD6Q9BV23 337 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 PLK3Q9H4B4 646 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 PLEKHF2Q9H8W4 249 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 MARCH7Q9H992 704 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 DUSP13Q9UII6 198 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 FBXO9Q9UK97 447 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-215ENST00000584944 LAMP3Q9UQV4 416 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 RPL36Q9Y3U8 105 aaKnown RBP11.98□□□□□ -0.49
TRAF4-215ENST00000584944 PMF1-BGLAPU3KQ54 211 aa11.98□□□□□ -0.49
TRAF4-215ENST00000584944 LOC100509620A0A075B734 347 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 IRGMA1A4Y4 181 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 CCDC182A6NF36 153 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 E7EQL1 145 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 M0R135 149 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 FADS2O95864 444 aaKnown RBP11.97□□□□□ -0.49
TRAF4-215ENST00000584944 LCATP04180 440 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 LOXP28300 417 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-215ENST00000584944 THBS4P35443 961 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 GLRXP35754 106 aa11.97□□□□□ -0.49
TRAF4-215ENST00000584944 PPP1CBP62140 327 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms