RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 DCAF10Q5QP82 559 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 RPL22L1Q6P5R6 122 aaKnown RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 TMPPEQ6ZT21 453 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 C5orf24Q7Z6I8 188 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 GPR137CQ8N3F9 429 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 A0A1B0GVI7 797 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 PLA2G10O15496 165 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 GMDSO60547 372 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 WT1P19544 449 aaPredicted RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 RASGEF1BQ0VAM2 473 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 SLC17A1Q14916 467 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 TMEM44Q2T9K0 475 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 PCGF3Q3KNV8 242 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 ANGPTL5Q86XS5 388 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 TUSC5Q8IXB3 177 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 PRR18Q8N4B5 295 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 GVQW1Q8N7I0 195 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 OR52N4Q8NGI2 321 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 DYRK2Q92630 601 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 TAAR9Q96RI9 348 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 SLC6A7Q99884 636 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 SELENOIQ9C0D9 397 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 PRMT8Q9NR22 394 aaPredicted RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 FBXO8Q9NRD0 319 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 GPR173Q9NS66 373 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 B3GNT3Q9Y2A9 372 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 BLACEA4D250 179 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 FAM157BP0CG42 384 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 FGF5P12034 268 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 ANXA7P20073 488 aaKnown RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 UQCRC1P31930 480 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 CASRP41180 1078 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 HTR5AP47898 357 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 RFX2P48378 723 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 ZFP36L1Q07352 338 aaKnown RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 ZMYND11Q15326 602 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 ZNF385CQ66K41 422 aaPredicted RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 OLFML2AQ68BL7 652 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 DMKNQ6E0U4 476 aaPredicted RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 AWAT2Q6E213 333 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 TMEM81Q6P7N7 255 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 MS4A15Q8N5U1 240 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 BOLLQ8N9W6 283 aaKnown RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 OR4D10Q8NGI6 311 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 NEK7Q8TDX7 302 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 MAP6Q96JE9 813 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 ST6GALNAC5Q9BVH7 336 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 PAPOLGQ9BWT3 736 aaKnown RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 ZNF319Q9P2F9 582 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 UPB1Q9UBR1 384 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 ZNF230Q9UIE0 474 aaPredicted RBP9.13□□□□□ -0.95
RFFL-212ENST00000584655 LIPGQ9Y5X9 500 aa9.13□□□□□ -0.95
RFFL-212ENST00000584655 USP9YO00507 2555 aaPredicted RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 ARPC3O15145 178 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 SPRY1O43609 319 aaPredicted RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 TLX3O43711 291 aaPredicted RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 MRPS14O60783 128 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 CRTAPO75718 401 aaPredicted RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 ANKRD34CP0C6C1 535 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 APOBEC1P41238 236 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 EVX1P49640 407 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ARFRP1Q13795 201 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 Q499Y3 187 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ZNF813Q6ZN06 617 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 P4HA3Q7Z4N8 544 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 SULF2Q8IWU5 870 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ZNF100Q8IYN0 542 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 SUN5Q8TC36 379 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 PIGCQ92535 297 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 TMEM43Q9BTV4 400 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 BAIAP2Q9UQB8 552 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 STMND1H3BQB6 276 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ARPC1BO15143 372 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 SLC43A1O75387 559 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 SCO1O75880 301 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 NTF4P34130 210 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 UGT2B10P36537 528 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 GDNFP39905 211 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 PPIAP62937 165 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 GPR176Q14439 515 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 MFSD13AQ14CX5 517 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 AGAP6Q5VW22 663 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ZNF585AQ6P3V2 769 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ANKRD16Q6P6B7 361 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 LINC00114Q6XXX2 140 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 FAM71CQ8NEG0 241 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 PLPPR2Q96GM1 343 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ZC3HAV1LQ96H79 300 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 FRMD6Q96NE9 622 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 AGAP4Q96P64 663 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 S100A13Q99584 98 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 SLC22A4Q9H015 551 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ZNF701Q9NV72 531 aaPredicted RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 CCDC59Q9P031 241 aaKnown RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 ZNF69Q9UC07 566 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 RHBDD3Q9Y3P4 386 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 ARFGEF3Q5TH69 2177 aa9.12□□□□□ -0.95
RFFL-212ENST00000584655 SDCBPO00560 298 aaPredicted RBP9.12□□□□□ -0.95
RFFL-212ENST00000584655 VAMP1P23763 118 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms