RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-225	ENST00000583438	PCGF3	Q3KNV8	242 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	C10orf128	Q5T292	105 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	RUSC1-AS1	Q66K80	236 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	REP15	Q6BDI9	236 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	REEP3	Q6NUK4	255 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SLC25A47	Q6Q0C1	308 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	BRD3OS	Q6XYD6	125 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SLC16A14	Q7RTX9	510 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	RANBP3L	Q86VV4	465 aa	Predicted RBP	6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	C10orf53	Q8N6V4	93 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ZNF283	Q8N7M2	679 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	RBM15B	Q8NDT2	890 aa	Known RBP	6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	VANGL1	Q8TAA9	524 aa	Predicted RBP	6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SLC7A6	Q92536	515 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ZNF566	Q969W8	418 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ZBTB18	Q99592	522 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PAIP2	Q9BPZ3	127 aa	Known RBP	6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	RAD21L1	Q9H4I0	556 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TMEM38A	Q9H6F2	299 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SLCO1B3	Q9NPD5	702 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	B3GAT2	Q9NPZ5	323 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	DDX28	Q9NUL7	540 aa	Known RBP	6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	MRPS18A	Q9NVS2	196 aa	Known RBP	6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PLEK2	Q9NYT0	353 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ARMCX1	Q9P291	453 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PRDM4	Q9UKN5	801 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	NUP50	Q9UKX7	468 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SLC7A7	Q9UM01	511 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	NPTN	Q9Y639	398 aa		6.56	□□□□□ -1.36
PPP4R1-225	ENST00000583438	NOTCH3	Q9UM47	2321 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PPIAL4E	A0A075B759	164 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TRAV40	A0A0B4J280	105 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PPIAL4C	A0A0B4J2A2	164 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438		A0A0G2JK05	382 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	KRTAP4-8	A0A0G2JLE6	195 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	IGHV3-64D	A0A0J9YX35	117 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438		A0A1W2PPL8	197 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	C5orf49	A4QMS7	147 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	CEACAM18	A8MTB9	384 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	DIRC3	C9JPN6	131 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PPIAL4D	F5H284	164 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	UBD	O15205	165 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	RGS16	O15492	202 aa	Predicted RBP	6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	MT-ATP6	P00846	226 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ELANE	P08246	267 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SBK2	P0C263	348 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PPIAL4F	P0DN26	164 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	CCNO	P22674	350 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	STOM	P27105	288 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PMEL	P40967	661 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	MTPN	P58546	118 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	LRRC74A	Q0VAA2	488 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	BAMBI	Q13145	260 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TBC1D28	Q2M2D7	210 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	HFE	Q30201	348 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	DEFB112	Q30KQ8	113 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	NRN1L	Q496H8	165 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ARMCX4	Q5H9R4	360 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	HHAT	Q5VTY9	493 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	WDR93	Q6P2C0	686 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	EPGN	Q6UW88	154 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	FOXL2NB	Q6ZUU3	175 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	IGFN1	Q86VF2	1251 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PARP8	Q8N3A8	854 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	KIR3DL3	Q8N743	410 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	LRRC75A	Q8NAA5	344 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ZNF420	Q8TAQ5	688 aa	Predicted RBP	6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TMEM255B	Q8WV15	326 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	C10orf82	Q8WW14	230 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ITLN1	Q8WWA0	313 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	LRTOMT	Q8WZ04	291 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	C11orf40	Q8WZ69	217 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	NSMAF	Q92636	917 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	POP5	Q969H6	163 aa	Known RBP	6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TMIGD2	Q96BF3	282 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TRIM44	Q96DX7	344 aa	Predicted RBP	6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SPDL1	Q96EA4	605 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ELMOD3	Q96FG2	381 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	CITED1	Q99966	193 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	BCL2L14	Q9BZR8	327 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PCDHAC1	Q9H158	963 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	RNF121	Q9H920	327 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	PATZ1	Q9HBE1	687 aa	Known RBP	6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	KCNK9	Q9NPC2	374 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TMEM106B	Q9NUM4	274 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	THAP1	Q9NVV9	213 aa		6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TET2	Q6N021	2002 aa	Predicted RBP	6.55	□□□□□ -1.36
PPP4R1-225	ENST00000583438	C5orf58	C9J3I9	102 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438		H0YL77	283 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	BLOC1S5-TXNDC5	H3BN57	136 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438		H7C1C5	153 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	CLDN34	H7C241	214 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438		M0QX08	132 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	MLNR	O43193	412 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	TPD52L2	O43399	206 aa	Known RBP	6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	RNF13	O43567	381 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	MT-ND5	P03915	603 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	SFTPB	P07988	381 aa		6.54	□□□□□ -1.36
PPP4R1-225	ENST00000583438	ANPEP	P15144	967 aa		6.54	□□□□□ -1.36

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