RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TRMUO75648 421 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 LHBP01229 141 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 IGF2P01344 180 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 SELLP14151 372 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 FPR3P25089 353 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 UBE2E1P51965 193 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 NME5P56597 212 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 IL5RAQ01344 420 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 CASP8Q14790 479 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 CNN3Q15417 329 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 NXNQ6DKJ4 435 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 TIFABQ6ZNK6 161 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 C10orf107Q8IVU9 208 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 ALDH16A1Q8IZ83 802 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 CMTM4Q8IZR5 234 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 FAM216BQ8N7L0 139 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 LY6G5BQ8NDX9 201 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 OR8J2Q8NGG1 315 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 Q8TCH9 128 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 SLC38A5Q8WUX1 472 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 TMEM19Q96HH6 336 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 ZNF582Q96NG8 517 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 WFDC6Q9BQY6 131 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 PRSS22Q9GZN4 317 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 C12orf10Q9HB07 376 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 TBCCD1Q9NVR7 557 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 P2RX2Q9UBL9 471 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 TIMM10BQ9Y5J6 103 aa11.3□□□□□ -0.6
CSNK1D-213ENST00000580446 OOEPA6NGQ2 149 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 MCIDASD6RGH6 385 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 ECDO95905 644 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 TFF1P04155 84 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 SERPINE1P05121 402 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 SCG5P05408 212 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 IKZF1Q13422 519 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 NPTX1Q15818 432 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 C10orf128Q5T292 105 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 KCTD18Q6PI47 426 aaPredicted RBP11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 ZNF621Q6ZSS3 439 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 ZNF826PQ6ZT77 177 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 OR6S1Q8NH40 331 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 PTP4A1Q93096 173 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 ISOC1Q96CN7 298 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 EDA2RQ9HAV5 297 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 EMC7Q9NPA0 242 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 RNF7Q9UBF6 113 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 ZNF232Q9UNY5 417 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 SAR1BQ9Y6B6 198 aa11.29□□□□□ -0.6
CSNK1D-213ENST00000580446 A0A1W2PPM1 405 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 PLIN3O60664 434 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 DBHP09172 617 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 CPA3P15088 417 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 RAC2P15153 192 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 SERPINB5P36952 375 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 RGS6P49758 472 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 CRISP3P54108 245 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 RAD23AP54725 363 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 RAB25P57735 213 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 ENDOGQ14249 297 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 INTS11Q5TA45 600 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 ANXA8L1Q5VT79 327 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 ULK3Q6PHR2 472 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 COLCA1Q6ZS62 124 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 DNAJA4Q8WW22 397 aaPredicted RBP11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 SEH1LQ96EE3 360 aa11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 CACYBPQ9HB71 228 aaKnown RBP11.28□□□□□ -0.6
CSNK1D-213ENST00000580446 A0A1W2PPL8 197 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 DOK2O60496 412 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 NUDT7P0C024 238 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 ACADSP16219 412 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 JUNBP17275 347 aaPredicted RBP11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 CDH12P55289 794 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 CD47Q08722 323 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 KCNJ8Q15842 424 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 PDCD4Q53EL6 469 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 FAM27BQ5VT28 67 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 HHATQ5VTY9 493 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 LCA5Q86VQ0 697 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 LSMEM1Q8N8F7 131 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 SPATA4Q8NEY3 305 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 HDAC2Q92769 488 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 NMD3Q96D46 503 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 CCDC115Q96NT0 180 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 PANX1Q96RD7 426 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 MCRIP2Q9BUT9 160 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 ARMC7Q9H6L4 198 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 TRIM36Q9NQ86 728 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 TMEM100Q9NV29 134 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 SELENONQ9NZV5 590 aa11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 NDRG4Q9ULP0 352 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-213ENST00000580446 HECTD4Q9Y4D8 3996 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 TRAV38-1A0A0B4J264 116 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms