RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 GPN1Q9HCN4 374 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 APMAPQ9HDC9 416 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF224Q9NZL3 707 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 VSX1Q9NZR4 365 aaPredicted RBP9.37□□□□□ -0.91
TOP3A-209ENST00000580095 OR52A1Q9UKL2 312 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 AUP1Q9Y679 476 aa9.37□□□□□ -0.91
TOP3A-209ENST00000580095 A0A1W2PQD3 144 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 PLSCR5A0PG75 271 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 TO15178 435 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 IFNA7P01567 189 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 CD2P06729 351 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 NFYAP23511 347 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-209ENST00000580095 HSF1Q00613 529 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 OR52W1Q6IF63 320 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 LIN54Q6MZP7 749 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 GUSBP11Q6P575 273 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-209ENST00000580095 GABRG1Q8N1C3 465 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 GVQW1Q8N7I0 195 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 CLEC1AQ8NC01 280 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 OR10G3Q8NGC4 313 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 COQ8AQ8NI60 647 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 ASB17Q8WXJ9 295 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 IFT46Q9NQC8 304 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 PRMT8Q9NR22 394 aaPredicted RBP9.36□□□□□ -0.91
TOP3A-209ENST00000580095 CACNA1EQ15878 2313 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 URB1O60287 2271 aaKnown RBP9.36□□□□□ -0.91
TOP3A-209ENST00000580095 A0A1W2PPL8 197 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 RAMP1O60894 148 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 AMY2AP04746 511 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 SFTPDP35247 375 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 PRKXP51817 358 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 MRPS10P82664 201 aaKnown RBP9.36□□□□□ -0.91
TOP3A-209ENST00000580095 ROM1Q03395 351 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 NR0B2Q15466 257 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 LRRC37A5PQ49AS3 106 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 PAPD4Q6PIY7 484 aaKnown RBP9.36□□□□□ -0.91
TOP3A-209ENST00000580095 EID2Q8N6I1 236 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 CHST4Q8NCG5 386 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 OR2I1PQ8NGU4 316 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 G6PC2Q9NQR9 355 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 ZDBF2Q9HCK1 2354 aa9.36□□□□□ -0.91
TOP3A-209ENST00000580095 UBE2QL1A1L167 161 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 OR2M5A3KFT3 312 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 RAB19A4D1S5 217 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 TMEM200CA6NKL6 621 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 ZNF814B7Z6K7 855 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 MASP2O00187 686 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 CCSO14618 274 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 PHYHO14832 338 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 OR2J2O76002 312 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 RAB3DO95716 219 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 LDOC1O95751 146 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 H2BFMP0C1H6 154 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 AKAIN1P0CW23 69 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 AFF3P51826 1226 aaKnown RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 SORDQ00796 357 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 NKAIN1Q4KMZ8 207 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 PRAMEF20Q5VT98 475 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 NUP54Q7Z3B4 507 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 ANKRD37Q7Z713 158 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 COMMD2Q86X83 199 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 ST7LQ8TDW4 575 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 ASB10Q8WXI3 467 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 CXorf58Q96LI9 332 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 ARL6Q9H0F7 186 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 RDH8Q9NYR8 311 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 OPN4Q9UHM6 478 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 FBXL2Q9UKC9 423 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 HHLA2Q9UM44 414 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 PRELID3BQ9Y3B1 194 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 PRRC2CQ9Y520 2896 aaKnown RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 WIPF3A6NGB9 483 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 MCRIP1C9JLW8 97 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 F8W036 122 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 NUPL2O15504 423 aaKnown RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 CSF1P09603 554 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 FAUP35544 74 aaKnown RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 EPHA4P54764 986 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 SSTP61278 116 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 GLT8D1Q68CQ7 371 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 FAM166AQ6J272 317 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 H1FNTQ75WM6 255 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 CADM4Q8NFZ8 388 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 OR2AK2Q8NG84 335 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 OR52N4Q8NGI2 321 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 OR13C9Q8NGT0 318 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 NUDCD2Q8WVJ2 157 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 C11orf40Q8WZ69 217 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 ADAT3Q96EY9 351 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 MNTQ99583 582 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 MRI1Q9BV20 369 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 RAB33BQ9H082 229 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 UBE2ZQ9H832 354 aaPredicted RBP9.35□□□□□ -0.91
TOP3A-209ENST00000580095 CNTD2Q9H8S5 307 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 KLK13Q9UKR3 277 aa9.35□□□□□ -0.91
TOP3A-209ENST00000580095 SLC5A6Q9Y289 635 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms