RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KRCC1Q9NPI7 259 aaPredicted RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RPRD1BQ9NQG5 326 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RASSF1Q9NS23 344 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 FAM118AQ9NWS6 357 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 GRHPRQ9UBQ7 328 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 AASSQ9UDR5 926 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 CYB5R1Q9UHQ9 305 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 KLHL21Q9UJP4 597 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 COA3Q9Y2R0 106 aaPredicted RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 AMDHD2Q9Y303 409 aa3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 RRP15Q9Y3B9 282 aaKnown RBP3.27□□□□□ -1.89
SMARCE1-215ENST00000578995 VPS13CQ709C8 3753 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 IGHV2OR16-5A0A0B4J2B6 119 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 TVP23AA6NH52 213 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 FAM171A2A8MVW0 826 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 E7EQL1 145 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ATP6V1G2-DDX39BF2Z307 99 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 H0YJX3 145 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 H3BN98 237 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 PRODHO43272 600 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 KHDRBS3O75525 346 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 GLCEO94923 617 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CLIC3O95833 236 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ABHD16AO95870 558 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 IGLV3-1P01715 115 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CD8AP01732 235 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 SERPINA5P05154 406 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 DANCRP0C864 163 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 OR8G3PP0DMU2 310 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CDH2P19022 906 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 NPR2P20594 1047 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 MSR1P21757 451 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 IL32P24001 234 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CD40P25942 277 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CRABP1P29762 137 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 PEX19P40855 299 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 WNT5AP41221 380 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF83P51522 516 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 AQP4P55087 323 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ISL1P61371 349 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 SNRPGP62308 76 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 LSM6P62312 80 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 RAB1AP62820 205 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 IL1RL1Q01638 556 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 NAAAQ02083 359 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 HSF2Q03933 536 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 TLE4Q04727 773 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 AQP6Q13520 282 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 MAD2L1BPQ15013 274 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 PPA1Q15181 289 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 TRIP10Q15642 601 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 LRRC36Q1X8D7 754 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 MST1LQ2TV78 715 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ZIK1Q3SY52 487 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 BEX5Q5H9J7 111 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 PABPC1L2AQ5JQF8 200 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC35D3Q5M8T2 416 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF691Q5VV52 312 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 NXNL2Q5VZ03 156 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 IGFL4Q6B9Z1 124 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 PLBD1Q6P4A8 553 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CORO6Q6QEF8 472 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 COLCA1Q6ZS62 124 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ZBTB49Q6ZSB9 765 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 RFPL4BQ6ZWI9 263 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CXXC5Q7LFL8 322 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 SSX6Q7RTT6 188 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ABHD12BQ7Z5M8 362 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CDC20BQ86Y33 519 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 CPOQ8IVL8 374 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 GLB1L2Q8IW92 636 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 C10orf67Q8IYJ2 551 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF101Q8IZC7 436 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 UBE2J2Q8N2K1 259 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 TCEANCQ8N8B7 351 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 LINC00482Q8N8I6 264 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 OR52L1Q8NGH7 329 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 OR51L1Q8NGJ5 315 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 OR2T4Q8NH00 348 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 RHOXF1Q8NHV9 184 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 SMAP2Q8WU79 429 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 NSMAFQ92636 917 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 NRGNQ92686 78 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 TFAP2CQ92754 450 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 STMN2Q93045 179 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 EME1Q96AY2 570 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ZC3HAV1LQ96H79 300 aaKnown RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ZNF582Q96NG8 517 aaPredicted RBP3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 SLC38A2Q96QD8 506 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 JMJD8Q96S16 334 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 RHNO1Q9BSD3 238 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 WACQ9BTA9 647 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 OR2H1Q9GZK4 316 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 LIME1Q9H400 295 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 POFUT1Q9H488 388 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 RIBC2Q9H4K1 309 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 ADGRL4Q9HBW9 690 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 B3GAT2Q9NPZ5 323 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 C8orf4Q9NR00 106 aa3.26□□□□□ -1.89
SMARCE1-215ENST00000578995 DDX28Q9NUL7 540 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms