RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CMTM4Q8IZR5 234 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 RDH10Q8IZV5 341 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 OR4M2Q8NGB6 313 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 OR5H6Q8NGV6 325 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 SYNPRQ8TBG9 265 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ITFG2Q969R8 447 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 PTX4Q96A99 478 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 C10orf35Q96D05 121 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 PGAM5Q96HS1 289 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ADGRG7Q96K78 797 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ZFP3Q96NJ6 502 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 SIGLEC12Q96PQ1 595 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 UCN2Q96RP3 112 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 SMAD5Q99717 465 aaKnown RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 SRXN1Q9BYN0 137 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 TTTY12Q9BZ98 90 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 LINC00470Q9BZP3 86 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 C11orf54Q9H0W9 315 aaPredicted RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 LDAHQ9H6V9 325 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 EXO5Q9H790 373 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ZNF703Q9H7S9 590 aaPredicted RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 RNF121Q9H920 327 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 EMC7Q9NPA0 242 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ZNF275Q9NSD4 429 aaPredicted RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 FAM206AQ9NX38 181 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 TAS2R8Q9NYW2 309 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 ASH2LQ9UBL3 628 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 FOXD3Q9UJU5 478 aaPredicted RBP9.85□□□□□ -0.83
SKA2-204ENST00000578519 LHFPL6Q9Y693 200 aa9.85□□□□□ -0.83
SKA2-204ENST00000578519 MPDZO75970 2070 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 IGKV3D-15A0A087WSY6 115 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 A0A0G2JMM0 328 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 A0A1W2PPB8 328 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 A0A1W2PRS3 328 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 METTL21EPA6NDL7 271 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 ZNF891A8MT65 544 aaPredicted RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 KIR3DP1A8MWS1 328 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 P2RY10O00398 339 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 EEF1E1O43324 174 aaKnown RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 RAMP1O60894 148 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 MRPL33O75394 65 aaKnown RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 DHFRP00374 187 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 IGFBP3P17936 291 aaPredicted RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 RAB3AP20336 220 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 HTR2CP28335 458 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 BDKRB2P30411 391 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 FAUP35544 74 aaKnown RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 CX3CR1P49238 355 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 TPTEP56180 551 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 RAB25P57735 213 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 ZNF766Q5HY98 468 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 ELFN2Q5R3F8 820 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 AGAP6Q5VW22 663 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 LINGO2Q7L985 606 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 TMPRSS7Q7RTY8 843 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 CADM3Q8N126 398 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 FAM109AQ8N4B1 249 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 ZIC4Q8N9L1 334 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 DRAXINQ8NBI3 349 aaPredicted RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 MDS2Q8NDY4 140 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 CPNE2Q96FN4 548 aaPredicted RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 ZNF385AQ96PM9 386 aaKnown RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 UQCC2Q9BRT2 126 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 ZNF416Q9BWM5 594 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 ACTR6Q9GZN1 396 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 DPAGT1Q9H3H5 408 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 TMEM138Q9NPI0 162 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 DDX28Q9NUL7 540 aaKnown RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 PLA2G3Q9NZ20 509 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 OR5V1Q9UGF6 321 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 ZNF391Q9UJN7 358 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 NOSIPQ9Y314 301 aaKnown RBP9.84□□□□□ -0.83
SKA2-204ENST00000578519 CACNG2Q9Y698 323 aa9.84□□□□□ -0.83
SKA2-204ENST00000578519 TRAV8-7A0A075B6U6 113 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 A0A0U1RQV5 110 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 ZNF716A6NP11 495 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 ZNF724A8MTY0 619 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 SULT1C2O00338 296 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 PLA2G10O15496 165 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 XRCC3O43542 346 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 GLSO94925 669 aaPredicted RBP9.83□□□□□ -0.84
SKA2-204ENST00000578519 ACSM4P0C7M7 580 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 CD37P11049 281 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 PSKH1P11801 424 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 CDAP32320 146 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 DDOSTP39656 456 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 STARP49675 285 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 SELENOPP49908 381 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 PRKXP51817 358 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 BTG1P62324 171 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 HIST1H3AP68431 136 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 SSBP1Q04837 148 aaKnown RBP9.83□□□□□ -0.84
SKA2-204ENST00000578519 RAB35Q15286 201 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 C1orf100Q5SVJ3 147 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 HIST2H3PS2Q5TEC6 136 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 RAB12Q6IQ22 244 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 CFAP77Q6ZQR2 320 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 HIST2H3AQ71DI3 136 aa9.83□□□□□ -0.84
SKA2-204ENST00000578519 KRT74Q7RTS7 529 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms