RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 MSL2Q9HCI7 577 aa14.46□□□□□ -0.09
MAP1LC3B-208ENST00000570189 TMCC3Q9ULS5 477 aa14.46□□□□□ -0.09
MAP1LC3B-208ENST00000570189 RER1O15258 196 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 RENP00797 406 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 HIST1H1CP16403 213 aaKnown RBP14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TNFSF4P23510 183 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TNFAIP6P98066 277 aaPredicted RBP14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 PGBD2Q6P3X8 592 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 LEG1Q6P5S2 330 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 RINLQ6ZS11 566 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 PEG10Q86TG7 708 aaKnown RBP14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 JAZF1Q86VZ6 243 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 GNPDA2Q8TDQ7 276 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ZFAND2BQ8WV99 257 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 APOBEC3DQ96AK3 386 aaPredicted RBP14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CMBLQ96DG6 245 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TSSK2Q96PF2 358 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 C19orf24Q9BVV8 132 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 KCNG2Q9UJ96 466 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 METRNQ9UJH8 293 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 POLR3KQ9Y2Y1 108 aaPredicted RBP14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 LYVE1Q9Y5Y7 322 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 NPTNQ9Y639 398 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 V9GYQ6 96 aa14.45□□□□□ -0.1
MAP1LC3B-208ENST00000570189 IFNL4K9M1U5 179 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SURF4O15260 269 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 PLPP2O43688 288 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 IGHV2-70P01814 119 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CPT2P23786 658 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 MSX2P35548 267 aaPredicted RBP14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ECH1Q13011 328 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 RSPO1Q2MKA7 263 aaPredicted RBP14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SLC36A3Q495N2 470 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TMEM155Q4W5P6 130 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ZNF770Q6IQ21 691 aaPredicted RBP14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SLC7A6Q92536 515 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 NMNAT3Q96T66 252 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 DDOQ99489 341 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 IFT27Q9BW83 186 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 REPIN1Q9BWE0 567 aaKnown RBP14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 C1QTNF5Q9BXJ0 243 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 RERGLQ9H628 205 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 MAGIXQ9H6Y5 334 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TMEM106BQ9NUM4 274 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 IL20Q9NYY1 176 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CYB5R1Q9UHQ9 305 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CDH10Q9Y6N8 788 aa14.44□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ARHGAP32A7KAX9 2087 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 A0A0G2JMP0 313 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 A0A0X1KG70 313 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR6C68A6NDL8 312 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 BHLHE40O14503 412 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 FSTL3O95633 263 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 GYS2P54840 703 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SPRNQ5BIV9 151 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 LCN8Q6JVE9 175 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SLC18B1Q6NT16 456 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SLC27A4Q6P1M0 643 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 C1orf229Q6ZS94 237 aaPredicted RBP14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 USP43Q70EL4 1123 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 FITM2Q8N6M3 262 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR4M2Q8NGB6 313 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR4C15Q8NGM1 316 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR4K13Q8NH42 304 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SIGLEC11Q96RL6 698 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 BTBD10Q9BSF8 475 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 LPAR2Q9HBW0 351 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 POLR1DQ9Y2S0 133 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 DOCK11Q5JSL3 2073 aa14.43□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TCRBV5S2A0A599 114 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 IQCF6A8MYZ5 107 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 DBHP09172 617 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ATP6V1B2P21281 511 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 NOS3P29474 1203 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 GGT2P36268 569 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 GK3PQ14409 553 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 MEP1BQ16820 701 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 RASSF6Q6ZTQ3 369 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 C1QL2Q7Z5L3 287 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SEMA6DQ8NFY4 1073 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR8G5Q8NG78 346 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR2Z1Q8NG97 314 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR52L1Q8NGH7 329 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 GAL3ST1Q99999 423 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TMPRSS13Q9BYE2 586 aa14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SRA1Q9HD15 236 aaKnown RBP14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 PNRC2Q9NPJ4 139 aaKnown RBP14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 RPRD1BQ9NQG5 326 aaKnown RBP14.42□□□□□ -0.1
MAP1LC3B-208ENST00000570189 A8MXK9 166 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 GPANK1O95872 356 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 MXRA7P84157 204 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ZNF181Q2M3W8 571 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ZNF362Q5T0B9 420 aaPredicted RBP14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OTPQ5XKR4 325 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 LRRC28Q86X40 367 aaPredicted RBP14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SPICQ8N5J4 248 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR13G1Q8NGZ3 307 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 NSL1Q96IY1 281 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OR2V2Q96R30 315 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CCT8L2Q96SF2 557 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms