RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 EFNA2O43921 213 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 NIPSNAP2O75323 286 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 KRT34O76011 436 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 CLDN9O95484 217 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 HOXD4P09016 255 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ACAA1P09110 424 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MPC1LP0DKB6 136 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 BCKDHAP12694 445 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ACADSP16219 412 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 OGNP20774 298 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 IMPDH1P20839 514 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MSR1P21757 451 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 RPL13AP40429 203 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 CRYBB2P43320 205 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 RPS5P46782 204 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 CYB561P49447 251 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 HLCSP50747 726 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ATP1B3P54709 279 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 OR4D2P58180 307 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MLF1P58340 268 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PLP1P60201 277 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 RPS15AP62244 130 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SKP1P63208 163 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 CDK16Q00536 496 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 OC90Q02509 493 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 LIPEQ05469 1076 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 GK3PQ14409 553 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ABRAXAS2Q15018 415 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 NSDHLQ15738 373 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 CD226Q15762 336 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MICBQ29980 383 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 KLHL38Q2WGJ6 581 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 TTLL9Q3SXZ7 439 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 HIKESHIQ53FT3 197 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ACSBG2Q5FVE4 666 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 OTUD3Q5T2D3 398 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 TMEM53Q6P2H8 277 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 UQCC3Q6UW78 93 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 C4orf22Q6V702 233 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 C3P1Q6ZMU1 363 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 NCCRP1Q6ZVX7 275 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SSX9Q7RTT3 188 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PRSS41Q7RTY9 318 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PEX26Q7Z412 305 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 NFE4Q86UQ8 179 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MICU2Q8IYU8 434 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SYCE1Q8N0S2 351 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 IQCF1Q8N6M8 205 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ZFP62Q8NB50 900 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 OR7G2Q8NG99 324 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 OR9Q2Q8NGE9 314 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 OR51Q1Q8NH59 317 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 CNIH3Q8TBE1 160 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 AENQ8WTP8 325 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 GLYATL2Q8WU03 294 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SLC38A4Q969I6 547 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SGK3Q96BR1 496 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PRRC1Q96M27 445 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PRAP1Q96NZ9 151 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 TECTBQ96PL2 329 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 GAL3ST1Q99999 423 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 C20orf24Q9BUV8 137 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ST6GALNAC5Q9BVH7 336 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 KIFC1Q9BW19 673 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ANKRD60Q9BZ19 345 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MRPL37Q9BZE1 423 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PCBD2Q9H0N5 130 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 NXF5Q9H1B4 397 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PLEKHA3Q9HB20 300 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 ANKHQ9HCJ1 492 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 KCNJ16Q9NPI9 418 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MRPL22Q9NWU5 206 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 IL36GQ9NZH8 169 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 BFARQ9NZS9 450 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PAK5Q9P286 719 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 GALPQ9UBC7 116 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 KLK11Q9UBX7 282 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 TAC3Q9UHF0 121 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 IKZF2Q9UKS7 526 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 TBC1D24Q9ULP9 559 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 TFR2Q9UP52 801 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 RASD1Q9Y272 281 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 MYRFQ9Y2G1 1151 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 KLF13Q9Y2Y9 288 aaPredicted RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SLC22A7Q9Y694 548 aa2.67□□□□□ -1.98
CNOT1-221ENST00000569924 PHF3Q92576 2039 aaKnown RBP2.67□□□□□ -1.98
CNOT1-221ENST00000569924 SCN3AQ9NY46 2000 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 VPS13CQ709C8 3753 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 FBN1P35555 2871 aaKnown RBP2.66□□□□□ -1.98
CNOT1-221ENST00000569924 IGKV3D-11A0A0A0MRZ8 115 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 TRBV11-1A0A0K0K1C0 115 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 IQCMA0A1B0GVH7 501 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 NKX2-6A6NCS4 301 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 FRG2CA6NGY1 282 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 SAGE2PA6NJ88 616 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 ACOD1A6NK06 481 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 ZNF724A8MTY0 619 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 ZNF879B4DU55 563 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 PRAC2D3DTV9 90 aa2.66□□□□□ -1.98
CNOT1-221ENST00000569924 E5RI56 91 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms