RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CPEB3Q8NE35 698 aaKnown RBP20.37■□□□□ 0.85
RAB40C-212ENST00000569575 AKR7LQ8NHP1 331 aa20.37■□□□□ 0.85
RAB40C-212ENST00000569575 POM121L2Q96KW2 1035 aa20.37■□□□□ 0.85
RAB40C-212ENST00000569575 OR8B4Q96RC9 309 aa20.37■□□□□ 0.85
RAB40C-212ENST00000569575 NOX3Q9HBY0 568 aa20.37■□□□□ 0.85
RAB40C-212ENST00000569575 NPAP1Q9NZP6 1156 aa20.37■□□□□ 0.85
RAB40C-212ENST00000569575 EIF3KQ9UBQ5 218 aaKnown RBP20.37■□□□□ 0.85
RAB40C-212ENST00000569575 IGHV1-18A0A0C4DH31 117 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 A0A1W2PQL4 384 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-212ENST00000569575 M0R1B8 84 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 XPNPEP2O43895 674 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 KRT8P05787 483 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 H2BFMP0C1H6 154 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 CECR9P0C854 216 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 NAAAQ02083 359 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 SNX33Q8WV41 574 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 ITFG2Q969R8 447 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 ELOVL3Q9HB03 270 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 CDH20Q9HBT6 801 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 CENPMQ9NSP4 180 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 MYRFQ9Y2G1 1151 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 PCDHGB5Q9Y5G0 923 aa20.36■□□□□ 0.85
RAB40C-212ENST00000569575 CDK1P06493 297 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 ZNF35P13682 527 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 COX6B1P14854 86 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 APEX1P27695 318 aaKnown RBP20.35■□□□□ 0.85
RAB40C-212ENST00000569575 RPS27P42677 84 aaKnown RBP20.35■□□□□ 0.85
RAB40C-212ENST00000569575 DRAM2Q6UX65 266 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 OR10S1Q8NGN2 331 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 CDCA4Q9BXL8 241 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 TBCCD1Q9NVR7 557 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 ERVK13-1Q9NX77 482 aa20.35■□□□□ 0.85
RAB40C-212ENST00000569575 CAB39Q9Y376 341 aaPredicted RBP20.35■□□□□ 0.85
RAB40C-212ENST00000569575 HEATR1Q9H583 2144 aaKnown RBP20.35■□□□□ 0.85
RAB40C-212ENST00000569575 CD3EP07766 207 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 HSD11B1P28845 292 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 RAD52P43351 418 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 RIDAP52758 137 aaKnown RBP20.34■□□□□ 0.85
RAB40C-212ENST00000569575 GALK2Q01415 458 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 CDONQ4KMG0 1287 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 ZNF684Q5T5D7 378 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 OTPQ5XKR4 325 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 TMEM154Q6P9G4 183 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 TMPRSS11AQ6ZMR5 421 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 AHSA2Q719I0 299 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 FAM220AQ7Z4H9 259 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 C1QTNF6Q9BXI9 259 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 BCL2L14Q9BZR8 327 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 COPS3Q9UNS2 423 aa20.34■□□□□ 0.85
RAB40C-212ENST00000569575 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-212ENST00000569575 C5orf49A4QMS7 147 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 DPRXA6NFQ7 191 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 METTL15A6NJ78 407 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 VSTM5A8MXK1 200 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 PTGES3LE9PB15 166 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 RGS10O43665 173 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 RPSAP08865 295 aaKnown RBP20.33■□□□□ 0.85
RAB40C-212ENST00000569575 PSKH1P11801 424 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 HCCSP53701 268 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 ZNF829Q3KNS6 432 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-212ENST00000569575 KCTD21Q4G0X4 260 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 PRSS48Q7RTY5 328 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 PLPPR2Q96GM1 343 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 NR1H4Q96RI1 486 aaPredicted RBP20.33■□□□□ 0.85
RAB40C-212ENST00000569575 IKZF2Q9UKS7 526 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 ERGIC3Q9Y282 383 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 KLHDC2Q9Y2U9 406 aa20.33■□□□□ 0.85
RAB40C-212ENST00000569575 FASNP49327 2511 aaKnown RBP20.33■□□□□ 0.84
RAB40C-212ENST00000569575 SPTAN1Q13813 2472 aaKnown RBP20.33■□□□□ 0.84
RAB40C-212ENST00000569575 LOC100509620A0A075B734 347 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 IGHV2OR16-5A0A0B4J2B6 119 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 TMEM129A0AVI4 362 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 DEFB108AA8MXU0 73 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 M0R135 149 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 TNFAIP8O95379 198 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 MMP16P51512 607 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 RPS23P62266 143 aaKnown RBP20.32■□□□□ 0.84
RAB40C-212ENST00000569575 ZNF85Q03923 595 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 BSPH1Q075Z2 132 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 ALKBH2Q6NS38 261 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 ZNF544Q6NX49 715 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 NUP37Q8NFH4 326 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 OR5L1Q8NGL2 311 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 OR52N1Q8NH53 320 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 APOBEC3DQ96AK3 386 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-212ENST00000569575 ZNF799Q96GE5 643 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 MS4A3Q96HJ5 214 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 C4orf45Q96LM5 186 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 TMEM204Q9BSN7 226 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 ALG8Q9BVK2 526 aa20.32■□□□□ 0.84
RAB40C-212ENST00000569575 PRR14LQ5THK1 2151 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 FAM221AA4D161 298 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 TRIM64A6NGJ6 449 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 A6NNC1 897 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 H3BSA7 217 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 APOL3O95236 402 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 LIMS3P0CW19 117 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 LIMS4P0CW20 117 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 CHN2P52757 468 aa20.31■□□□□ 0.84
RAB40C-212ENST00000569575 ADAM5Q6NVV9 412 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms