RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OR6K6Q8NGW6 343 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 SYNPRQ8TBG9 265 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 SLC25A40Q8TBP6 338 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 ST7LQ8TDW4 575 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 IPCEF1Q8WWN9 437 aaPredicted RBP8.39□□□□□ -1.07
CLK3-220ENST00000567992 GTF3AQ92664 365 aaKnown RBP8.39□□□□□ -1.07
CLK3-220ENST00000567992 OSBPL10Q9BXB5 764 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 GABARAPL3Q9BY60 117 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 OR2J1Q9GZK6 312 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 S100A14Q9HCY8 104 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 DDX28Q9NUL7 540 aaKnown RBP8.39□□□□□ -1.07
CLK3-220ENST00000567992 TBCCD1Q9NVR7 557 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 TLN2Q9Y4G6 2542 aa8.39□□□□□ -1.07
CLK3-220ENST00000567992 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.07
CLK3-220ENST00000567992 SETD2Q9BYW2 2564 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 IGHV4-30-2A0A087WSY4 118 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 CCDC182A6NF36 153 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 VSTM5A8MXK1 200 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 PRR23D1E9PI22 279 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 E9PQ18 207 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 H3BSA7 217 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 H7C1Q1 480 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 M0R233 179 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 PRODHO43272 600 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 PRKYO43930 277 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 NCR1O76036 304 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 GLCEO94923 617 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 ABHD16AO95870 558 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 ALPLP05186 524 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 ADRA2AP08913 450 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 SPARCP09486 303 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 PRR23D2P0DMB1 279 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 NAT2P11245 290 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 ZNF823P16415 610 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 IGFBP5P24593 272 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 FMO3P31513 532 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 OTX1P32242 354 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 POLR2IP36954 125 aaKnown RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 BLVRAP53004 296 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 NUDT6P53370 316 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 KLF3P57682 345 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 PPP1CBP62140 327 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 TMEM154Q6P9G4 183 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 COLCA1Q6ZS62 124 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 CPOQ8IVL8 374 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 TIGD4Q8IY51 512 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 KLF14Q8TD94 323 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 ZMYND19Q96E35 227 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 DCLRE1CQ96SD1 692 aaKnown RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 AMELYQ99218 206 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 ATF6BQ99941 703 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 VRK1Q99986 396 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 TPK1Q9H3S4 243 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 DYNLRB1Q9NP97 96 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 TVP23BQ9NYZ1 205 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 USE1Q9NZ43 259 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 EIF3KQ9UBQ5 218 aaKnown RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 DUSP13Q9UII6 198 aa8.38□□□□□ -1.07
CLK3-220ENST00000567992 FBXO9Q9UK97 447 aaPredicted RBP8.38□□□□□ -1.07
CLK3-220ENST00000567992 ABCA2Q9BZC7 2435 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 A0A1W2PPW3 197 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 J3QW42 95 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 ZNF593O00488 134 aaPredicted RBP8.37□□□□□ -1.07
CLK3-220ENST00000567992 EI24O14681 340 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 SELENOFO60613 162 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 ACSM4P0C7M7 580 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 FOSL1P15407 271 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 PAICSP22234 425 aaKnown RBP8.37□□□□□ -1.07
CLK3-220ENST00000567992 GSTT1P30711 240 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 MMP15P51511 669 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 ECH1Q13011 328 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 SNAPC1Q16533 368 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 ALKBH6Q3KRA9 238 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 CXXC5Q7LFL8 322 aaKnown RBP8.37□□□□□ -1.07
CLK3-220ENST00000567992 DCXRQ7Z4W1 244 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 C1orf174Q8IYL3 243 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 PQLC1Q8N2U9 271 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 OR2AJ1Q8NGZ0 328 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 C10orf105Q8TEF2 133 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 OTULINQ96BN8 352 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 C18orf12Q96KH6 178 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 INTS14Q96SY0 518 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 PITX2Q99697 317 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 RBM4BQ9BQ04 359 aaKnown RBP8.37□□□□□ -1.07
CLK3-220ENST00000567992 CDADC1Q9BWV3 514 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 C1QTNF5Q9BXJ0 243 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 RAB1BQ9H0U4 201 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 OR51V1Q9H2C8 321 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 ELOVL3Q9HB03 270 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 TAAR3PQ9P1P4 343 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 KLHDC2Q9Y2U9 406 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 STARD10Q9Y365 291 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 GRIP1Q9Y3R0 1128 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 TANC2Q9HCD6 1990 aa8.37□□□□□ -1.07
CLK3-220ENST00000567992 SVEP1Q4LDE5 3571 aa8.36□□□□□ -1.07
CLK3-220ENST00000567992 C5orf63A6NC05 138 aa8.36□□□□□ -1.07
CLK3-220ENST00000567992 ZSCAN5BA6NJL1 495 aa8.36□□□□□ -1.07
CLK3-220ENST00000567992 C17orf100A8MU93 164 aa8.36□□□□□ -1.07
CLK3-220ENST00000567992 VWC2LB2RUY7 222 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms