RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ZFP36P26651 326 aaKnown RBP23.31■■□□□ 1.32
UBFD1-206ENST00000566669 OMPP47874 163 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 SRP9P49458 86 aaKnown RBP23.31■■□□□ 1.32
UBFD1-206ENST00000566669 ZNF154Q13106 437 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 SMARCD3Q6STE5 483 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 DEFB108BQ8NET1 73 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 OR8G5Q8NG78 346 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 ITLN1Q8WWA0 313 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 DVL3Q92997 716 aaPredicted RBP23.31■■□□□ 1.32
UBFD1-206ENST00000566669 NUAK2Q9H093 628 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 RERGLQ9H628 205 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 OR5V1Q9UGF6 321 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 IER3IP1Q9Y5U9 82 aa23.31■■□□□ 1.32
UBFD1-206ENST00000566669 UNC119BA6NIH7 251 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 F5H0A9 414 aaPredicted RBP23.3■■□□□ 1.32
UBFD1-206ENST00000566669 TMEM178BH3BS89 294 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 PPIAL4GP0DN37 164 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 ZNF12P17014 697 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 ZMYND11Q15326 602 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 CCDC92Q53HC0 331 aaPredicted RBP23.3■■□□□ 1.32
UBFD1-206ENST00000566669 C1orf94Q6P1W5 598 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 ATG16L2Q8NAA4 619 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 SIGLEC11Q96RL6 698 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 POFUT1Q9H488 388 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 GCM1Q9NP62 436 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 MED4Q9NPJ6 270 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 DCAF13Q9NV06 445 aaKnown RBP23.3■■□□□ 1.32
UBFD1-206ENST00000566669 GMPR2Q9P2T1 348 aaKnown RBP23.3■■□□□ 1.32
UBFD1-206ENST00000566669 INSIG2Q9Y5U4 225 aa23.3■■□□□ 1.32
UBFD1-206ENST00000566669 LRRC30A6NM36 301 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 SOCS2O14508 198 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 UBA52P62987 128 aaKnown RBP23.29■■□□□ 1.32
UBFD1-206ENST00000566669 HIST1H3AP68431 136 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 FOXL1Q12952 345 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 ECH1Q13011 328 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 ZNF181Q2M3W8 571 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 SPRNQ5BIV9 151 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 HIST2H3PS2Q5TEC6 136 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 HIST2H3AQ71DI3 136 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 ZNF771Q7L3S4 317 aaPredicted RBP23.29■■□□□ 1.32
UBFD1-206ENST00000566669 TSEN54Q7Z6J9 526 aaKnown RBP23.29■■□□□ 1.32
UBFD1-206ENST00000566669 C1orf87Q8N0U7 546 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 ZDHHC22Q8N966 263 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 DHRS1Q96LJ7 313 aa23.29■■□□□ 1.32
UBFD1-206ENST00000566669 RER1O15258 196 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 MDH1P40925 334 aaKnown RBP23.28■■□□□ 1.32
UBFD1-206ENST00000566669 PSME3P61289 254 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 TUSC1Q2TAM9 212 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 SLC36A3Q495N2 470 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 GLYATQ6IB77 296 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 DOK3Q7L591 496 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 PLEKHA8Q96JA3 519 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 C7orf34Q96L11 122 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 HCAR1Q9BXC0 346 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 MIOXQ9UGB7 285 aa23.28■■□□□ 1.32
UBFD1-206ENST00000566669 ARPC3O15145 178 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 SPRY1O43609 319 aaPredicted RBP23.27■■□□□ 1.32
UBFD1-206ENST00000566669 RENP00797 406 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 PRDX6P30041 224 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 IFNGR2P38484 337 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 MMP16P51512 607 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 COX10Q12887 443 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 JAZF1Q86VZ6 243 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 SLC7A6Q92536 515 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 GORASP2Q9H8Y8 452 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 DCAF16Q9NXF7 216 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 DYSFO75923 2080 aa23.27■■□□□ 1.32
UBFD1-206ENST00000566669 IQCF6A8MYZ5 107 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 IDH3BO43837 385 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 NCK1P16333 377 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 SLC6A6P31641 620 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 CDKN2AP42771 156 aaKnown RBP23.26■■□□□ 1.31
UBFD1-206ENST00000566669 BTNL3Q6UXE8 466 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 LRRN1Q6UXK5 716 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 PTCHD4Q6ZW05 846 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 ERGIC1Q969X5 290 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 MEGF10Q96KG7 1140 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 SLC30A2Q9BRI3 323 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 ESM1Q9NQ30 184 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 MMP26Q9NRE1 261 aa23.26■■□□□ 1.31
UBFD1-206ENST00000566669 NOP16Q9Y3C1 178 aaKnown RBP23.26■■□□□ 1.31
UBFD1-206ENST00000566669 TRBV4-1A0A0J9YWV2 114 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 TRAPPC2LH3BP13 241 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 PRTN3P24158 256 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 CENPAP49450 140 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 RFX4Q33E94 735 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 AWAT1Q58HT5 328 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 NLRC3Q7RTR2 1065 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 CELF2-AS1Q8N7Q2 184 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 FANK1Q8TC84 345 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 ERMAPQ96PL5 475 aaPredicted RBP23.25■■□□□ 1.31
UBFD1-206ENST00000566669 SSBP3Q9BWW4 388 aaPredicted RBP23.25■■□□□ 1.31
UBFD1-206ENST00000566669 PTTG3PQ9NZH4 202 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 LHFPL6Q9Y693 200 aa23.25■■□□□ 1.31
UBFD1-206ENST00000566669 A0A1B0GWJ7 208 aa23.24■■□□□ 1.31
UBFD1-206ENST00000566669 CEACAM18A8MTB9 384 aa23.24■■□□□ 1.31
UBFD1-206ENST00000566669 WNT2P09544 360 aa23.24■■□□□ 1.31
UBFD1-206ENST00000566669 HKR1P10072 659 aa23.24■■□□□ 1.31
UBFD1-206ENST00000566669 FPR3P25089 353 aa23.24■■□□□ 1.31
UBFD1-206ENST00000566669 FXYD6P3P58550 94 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms