RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ANKRD63C9JTQ0 380 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 E9PAM4 449 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 H7C2Y5 167 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SLC17A2O00624 439 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 NTN3O00634 580 aaPredicted RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SULT1B1O43704 296 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 LMX1BO60663 402 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 RDH16O75452 317 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CRLF1O75462 422 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR5F1O95221 314 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 UTS2O95399 124 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 AHSA1O95433 338 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 PSMG1O95456 288 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ATP6V1G2O95670 118 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SNAP29O95721 258 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 AIFM1O95831 613 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SLC35E2P0CK97 266 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CT45A6P0DMU7 189 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CT45A5P0DMU8 189 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CT45A7P0DMV0 189 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 LAMP1P11279 417 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 IGHV1-2P23083 117 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 HOXA6P31267 233 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CDKN2CP42773 168 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 VDAC2P45880 294 aaPredicted RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 GPR6P46095 362 aaPredicted RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 HCCSP53701 268 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 UGT2B15P54855 530 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 DLX5P56178 289 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 TAS2R60P59551 318 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR2B8PP59922 312 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 HILS1P60008 231 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 PRKCDQ05655 676 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 FHL1Q13642 323 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 TWIST1Q15672 202 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SLC1A5Q15758 541 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 UAP1Q16222 522 aaPredicted RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ZSCAN26Q16670 478 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 BSXQ3C1V8 233 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 COQ5Q5HYK3 327 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CT45A1Q5HYN5 189 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 VAX1Q5SQQ9 334 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 THEM4Q5T1C6 240 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 IDNKQ5T6J7 187 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 RESP18Q5W5W9 173 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 THOC7Q6I9Y2 204 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR5M10Q6IEU7 315 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM173BQ6P4H8 233 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SSX7Q7RTT5 188 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 THOC6Q86W42 341 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF677Q86XU0 584 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CBLN2Q8IUK8 224 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SKA3Q8IX90 412 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF786Q8N393 782 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ATPAF2Q8N5M1 289 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF740Q8NDX6 193 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR5T1Q8NG75 326 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR5AR1Q8NGP9 310 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR2A12Q8NGT7 310 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR10R2Q8NGX6 335 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CT45A3Q8NHU0 189 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CCDC26Q8TAB7 109 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 FLVCR1-AS1Q8TAF5 88 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF461Q8TAF7 563 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM76AQ8TAV0 307 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SFXN5Q8TD22 340 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 AGAP11Q8TF27 550 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 LRRC29Q8WV35 223 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 TFB1MQ8WVM0 346 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 TAF15Q92804 592 aaKnown RBP eCLIP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CALN1Q9BXU9 219 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 SRXN1Q9BYN0 137 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 UPF3AQ9H1J1 476 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 PARLQ9H300 379 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 OR51J1Q9H342 316 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 WDR54Q9H977 334 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ISG20L2Q9H9L3 353 aaKnown RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 C6orf50Q9HD87 102 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CALYQ9NYX4 217 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 USE1Q9NZ43 259 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 MAT2BQ9NZL9 334 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 VAPAQ9P0L0 249 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 Q9UF83 564 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ASIC3Q9UHC3 531 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 C3orf18Q9UK00 162 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 PRELID1Q9Y255 219 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 PRG3Q9Y2Y8 225 aaPredicted RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 POLR3HQ9Y535 204 aaPredicted RBP2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 IQGAP1P46940 1657 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 NRKQ7Z2Y5 1582 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 ABCB11O95342 1321 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 CCDC88BA6NC98 1476 aa2.65□□□□□ -1.99
HERPUD1-211ENST00000566550 WIZO95785 1651 aa2.64□□□□□ -1.99
HERPUD1-211ENST00000566550 IGLV4-3A0A075B6K6 122 aa2.64□□□□□ -1.99
HERPUD1-211ENST00000566550 A0A1B0GU03 582 aa2.64□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM213A2RRL7 107 aa2.64□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM172BPA6NC97 362 aa2.64□□□□□ -1.99
HERPUD1-211ENST00000566550 NCBP2LA6PVI3 153 aaKnown RBP2.64□□□□□ -1.99
HERPUD1-211ENST00000566550 ERVV-1B6SEH8 477 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms