RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CPNE9Q8IYJ1 553 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CCDC170Q8IYT3 715 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TBC1D21Q8IYX1 336 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 C6orf223Q8N319 242 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 RPRMLQ8N4K4 120 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 KIF2BQ8N4N8 673 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 RNF10Q8N5U6 811 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 UBL4BQ8N7F7 174 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZNF321PQ8N8H1 164 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZNF709Q8N972 641 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CCDC89Q8N998 374 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 UXS1Q8NBZ7 420 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DENND6BQ8NEG7 585 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 OR2A1Q8NGT9 310 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DNAJA4Q8WW22 397 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 PSMF1Q92530 271 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 N4BP2L2Q92802 583 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 TSLPQ969D9 159 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 LHX4Q969G2 390 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TMEM159Q96B96 161 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DNAJA3Q96EY1 480 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CFAP36Q96G28 342 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZNF514Q96K75 400 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 GBP5Q96PP8 586 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 QKIQ96PU8 341 aaKnown RBP eCLIP0.94□□□□□ -2.26
SMG1-212ENST00000566328 VPS35Q96QK1 796 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 OR4K3Q96R72 315 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 CYTH2Q99418 400 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 GPR21Q99679 349 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NPAS2Q99743 824 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PELOQ9BRX2 385 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 TIMM29Q9BSF4 260 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DDA1Q9BW61 102 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 NLNQ9BYT8 704 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SLC7A5P2Q9GIP4 190 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZNF350Q9GZX5 532 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DEFB127Q9H1M4 99 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 DPH5Q9H2P9 285 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 KIR3DX1Q9H7L2 352 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZDHHC11Q9H8X9 412 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ANKRA2Q9H9E1 313 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZNF160Q9HCG1 818 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TREX1Q9NSU2 369 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 C20orf96Q9NUD7 363 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 SOHLH2Q9NX45 425 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 UTP6Q9NYH9 597 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 EURLQ9NYK6 297 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 AKAP7Q9P0M2 348 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 VPS18Q9P253 973 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ANKMY1Q9P2S6 941 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 TRPC4Q9UBN4 977 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ZNF490Q9ULM2 529 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 RPL26L1Q9UNX3 145 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 SLC22A14Q9Y267 594 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 IFT52Q9Y366 437 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.94□□□□□ -2.26
SMG1-212ENST00000566328 NAV3Q8IVL0 2385 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 PHF3Q92576 2039 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 FREM1Q5H8C1 2179 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 ANK2Q01484 3957 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 HEATR1Q9H583 2144 aaKnown RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 HIVEP1P15822 2718 aa0.94□□□□□ -2.26
SMG1-212ENST00000566328 HRNRQ86YZ3 2850 aaPredicted RBP0.94□□□□□ -2.26
SMG1-212ENST00000566328 USF3Q68DE3 2245 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 MN1Q10571 1320 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 ZNF106Q9H2Y7 1883 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 ABCA12Q86UK0 2595 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SETD2Q9BYW2 2564 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 PPIAL4EA0A075B759 164 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PPIAL4CA0A0B4J2A2 164 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CXorf51AA0A1B0GTR3 108 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TLCD2A6NGC4 264 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 VSTM2BA6NLU5 285 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 BTNL10A8MVZ5 291 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C2orf74A8MZ97 194 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 HACD1B0YJ81 288 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 IDSB3KWA1 339 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C4orf51C9J302 202 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C9JVG2 144 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 E7EQ34 232 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 E9PLD3 99 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PPIAL4DF5H284 164 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 H0YC42 278 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 MKRN2OSH3BPM6 223 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 GOLGA8RI6L899 631 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 UBXN8O00124 270 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PDLIM1O00151 329 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CCL21O00585 134 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PRMT5O14744 637 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 RASGRF2O14827 1237 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 LIN7AO14910 233 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 ZW10O43264 779 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 RAD51CO43502 376 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CHST10O43529 356 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ZBTB14O43829 449 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 GMFGO60234 142 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CDC40O60508 579 aaKnown RBP eCLIP0.93□□□□□ -2.26
SMG1-212ENST00000566328 RDH16O75452 317 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 EEDO75530 441 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 ETHE1O95571 254 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms